DRSC/TRiP Functional Genomics Resources

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Protein Alignment RecQ5 and RECQL4

DIOPT Version :10

Sequence 1:NP_729983.1 Gene:RecQ5 / 39594 FlyBaseID:FBgn0027375 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001399948.1 Gene:RECQL4 / 9401 HGNCID:9949 Length:1233 Species:Homo sapiens


Alignment Length:509 Identity:157/509 - (30%)
Similarity:246/509 - (48%) Gaps:83/509 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMSENQ---ITIVF 68
            |.:||:: .||..|:.. ||:||...:.....:.| :|||:|||||:|||.|:...:   :|:|.
Human   469 VFQALEQ-LGHQAFRPG-QERAVMRILSGISTLLV-LPTGAGKSLCYQLPALLYSRRSPCLTLVV 530

  Fly    69 SPLLALIKDQIDHLTKLKVPADSLNSKMSTKERDRVIMDLKAVRTNLKFLYITPEQAATKFFQDL 133
            ||||:|:.||:..|... :.|..::|.|:.|:|:.|:..::|.:.::  |.:|||....   ...
Human   531 SPLLSLMDDQVSGLPPC-LKAACIHSGMTRKQRESVLQKIRAAQVHV--LMLTPEALVG---AGG 589

  Fly   134 LQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLGE-LRSKYSDVIWLALTATASREVKEDIYK 197
            |....:...:|:..:|||||:|||.|:|||.||::.: ||.:.....:|.|||||:|....|:.:
Human   590 LPPAAQLPPVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCFLGLTATATRRTASDVAQ 654

  Fly   198 QLR------LHQPVAQFSTPSFRKNLFYDIVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQR 256
            .|.      ||.|.   ..|:   ||...:    |::.|    .|.|...|...|.|::....  
Human   655 HLAVAEEPDLHGPA---PVPT---NLHLSV----SMDRD----TDQALLTLLQGKRFQNLDSI-- 703

  Fly   257 GCGIVYCRTRDQVERMAI-------GVTKQGIG-------AVAYHAGLKTGERTEVQEAWMRGDQ 307
               |:||..|:..||:|.       .....|.|       |.|||||:.:.||..||.|:|:|..
Human   704 ---IIYCNRREDTERIAALLRTCLHAAWVPGSGGRAPKTTAEAYHAGMCSRERRRVQRAFMQGQL 765

  Fly   308 PIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAGRDGLQSYCRLYY--GREDVRSIRF 370
            .::.||.:||||:|:|.||.|:|..:|.:..:|.|..|||||||..::|.|:.  ..||:|.:|.
Human   766 RVVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLFLQPQGEDLRELRR 830

  Fly   371 LLQNDAHRARGRGDKELLTERAIKQ-FEKITEFCERTTCRHKLFSDFFGDPTPDCSGQCDVCKRP 434
            .:..|:       ...|..:|.::: |...|..|.|..          .:......|:..|.|.|
Human   831 HVHADS-------TDFLAVKRLVQRVFPACTCTCTRPP----------SEQEGAVGGERPVPKYP 878

  Fly   435 KKAEKALEIFH-------RLCM--DDAFKSHISLQDCADLYEGGRPGIKRAAQE 479
              .::|.::.|       |:||  :.|....:::|......||..||:.....|
Human   879 --PQEAEQLSHQAAPGPRRVCMGHERALPIQLTVQALDMPEEGEEPGVSHRGVE 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RecQ5NP_729983.1 RecQ 5..447 CDD:440280 147/473 (31%)
SMC_N 658..>963 CDD:481474
RECQL4NP_001399948.1 RecQL4_SLD2_NTD 2..50 CDD:412085
RecQ 471..>827 CDD:440280 131/383 (34%)
Blue background indicates that the domain is not in the aligned region.

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