Protein Alignment RecQ5 and RecQl3

DIOPT Version :10

• Sequence 1: NP_729983.1
• Gene: RecQ5 / 39594
• FlyBaseID: FBgn0027375
• Length: 1058
• Species: Drosophila melanogaster
• Sequence 2: NP_195299.2
• Gene: RecQl3 / 829727
• AraportID: AT4G35740
• Length: 713
• Species: Arabidopsis thaliana
• Alignment Length: 762
• Identity: 223/762 - (29%)
• Similarity: 388/762 - (50%)
• Gaps: 93/762 - (12%)

  Fly     1 MAHESAVHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMSENQIT 65
            :|.:.|:.:.|:.||||:.|:.. |.:|:: ||...:|.:..||||.|||:|:|:|.| ::..|.
plant    18 VAGKEALVKLLRWHFGHADFRGK-QLEAIQ-AVVSGRDCFCLMPTGGGKSICYQIPAL-AKPGIV 79

  Fly    66 IVFSPLLALIKDQIDHLTKLKVPADSLNSKMSTKERDRVIMDLKAVRTNLKFLYITPEQAATKFF 130
            :|.|||:||:::|:..|.:..:.|:.|:|..:|..::::..||.:.:.:::.||:|||..|||.|
plant    80 LVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGF 144

  Fly   131 QDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLGELRSKYSDVIWLALTATASREVKEDI 195
            ...|:.||....|...|:|||||:|.|||||||.|.:|..||...:||..|||||||:.:|::|:
plant   145 MLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDV 209

  Fly   196 YKQLRLHQPVAQFSTPSF-RKNLFYDIVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCG 259
            ...|.|..|:...|  || |.|:||::.||:.:::.:..|.:..:.| ||.            |.
plant   210 IDSLNLRNPLVLKS--SFNRPNIFYEVRYKDLLDNAYTDLGNLLKSC-GNI------------CA 259

  Fly   260 IVYCRTRDQVERMAIGVTKQGIGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPS 324
            |:||..|...:.:::.::..||.:.||||||.:..|:.|.:.|:...:.||.||.:||||:||..
plant   260 IIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKD 324

  Fly   325 VRFVIHWDVPQNVAAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLT 389
            ||.|.|:::|:::.::||||||||||.|.|...||||.:|.:.:.:||:|..::      |...:
plant   325 VRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENK------KSSSS 383

  Fly   390 ERAIKQFEKITEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKALEIFHRLCMDDA 452
            ::....||:|..:||.:.||.|...:.||:  |...|...||.||.|.:....||..    |..|
plant   384 KKPTSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEEL----MTTA 444

  Fly   453 FKSHISLQDCADLY---EGGRPGIKRAAQEYAGGESGSDDDSGQSHSSMA-KRAKKESQDFIKQQ 513
            .:.|.|    :.::   ...:....:.::.:...|.||:.:...|.|..| :.|...:...:.::
plant   445 SRRHNS----SRIFITSSNNKTNEGQYSEFWNRNEDGSNSNEEISDSDDATEAANSVTGPKLSKK 505

  Fly   514 FNLRKQISAARQLEQETIAQISRVRMAEATEKKIAGLQATHREKYLTALIDALK--ANVDKCKDE 576
            ..|.:::....|.|::...:..:|:.:|......| |:.:.:::.|.||...|:  |.|::...:
plant   506 LGLDEKLVLLEQAEEKYYERNKQVKKSEKNAISEA-LRDSSKQRLLDALTRVLQLLACVEEIDSQ 569

  Fly   577 PGQQPKSVLKYNDYEAMSVNMEYDVFRQNKVANMYRHALVKEISTIKKLTEQTKLLPLLVDYIPK 641
            .|.:......|..|.....:..|     :::|     :.|:.:.|..:....|:|
plant   570 KGSEFLENECYRKYSKAGKSFYY-----SQIA-----STVRWLGTASRDELMTRL---------- 614

  Fly   642 PETSSKGAWTGGSVAYFERKLKELEEQRPQSLKEVPKALKDRKGFKQENSKQTSISSFFKKEIKE 706
                       .||....|:.:.|||  |....|..:.:::     :::.|..::.|...:..:|
plant   615 -----------SSVVSLAREQEPLEE--PLLATEPVENIEE-----EDDGKTNTVESRVDEPTQE 661

  Fly   707 ---EPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVKEESVTPESS 750
               .||.|||:..:|...||.::..:          :|:.::..:||
plant   662 LVVSPILSPIRLPQVPSFSEFVNRRK----------IKQNTLIDKSS 698

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RecQ5	NP_729983.1	RecQ	5..447	CDD:440280	167/444 (38%)
		SMC_N	658..>963	CDD:481474	20/96 (21%)
RecQl3	NP_195299.2	RecQ	21..433	CDD:440280	165/435 (38%)