DRSC/TRiP Functional Genomics Resources

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Protein Alignment RecQ5 and RECQI1

DIOPT Version :10

Sequence 1:NP_729983.1 Gene:RecQ5 / 39594 FlyBaseID:FBgn0027375 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_187225.2 Gene:RECQI1 / 819743 AraportID:AT3G05740 Length:606 Species:Arabidopsis thaliana


Alignment Length:451 Identity:176/451 - (39%)
Similarity:259/451 - (57%) Gaps:45/451 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HESAVHEALKK----------HFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTGSGKSLCFQLPG 57
            ||:..:|.|:.          .||:..|: .||.:|.:.::::| |.:|.||||.|||||:|||.
plant   180 HETPSYEELQALDDLEFANLVIFGNKVFR-PLQHQACRASMERK-DCFVLMPTGGGKSLCYQLPA 242

  Fly    58 LMSENQITIVFSPLLALIKDQIDHLT-KLKVPADSLNSKMSTKERDRVIMDLKAVRTNLKFLYIT 121
            .:... :|||.||||:||:|||..|. |..:||..|||:.::.:...|:.:|:....:.|.||:|
plant   243 TLKAG-VTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVT 306

  Fly   122 PEQ-AATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLGELRSKYSDVIWLALTA 185
            ||: |.:..|.:.|:.|.:...||.|.||||||||||||||||||.:||.|:..:..|..:||||
plant   307 PEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTA 371

  Fly   186 TASREVKEDIYKQLRLHQPVAQFSTPSF-RKNLFYDIVYKNSIEDDFQHLADFARHCLGNPKEFK 249
            ||:..|.:|:.|.||:  |.|.....|| |.||.|:::.|.  ::..:.|.:..|      ..||
plant   372 TATESVCQDVLKSLRI--PRAPVLKMSFDRINLKYEVIVKT--KEPLKQLQELLR------DRFK 426

  Fly   250 DTPKPQRGCGIVYCRTRDQVERMAIGVT-KQGIGAVAYHAGLKTGERTEVQEAWMRGDQPIICAT 313
            |.      .|||||.::.:...:|..:. |..:..|.||||:...:|.:||..|..|:..|:|||
plant   427 DQ------SGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCAT 485

  Fly   314 NSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHR 378
            .:||||:||..||||||..:.:.|.:||||||||||||||:.|...|.::|...:..:|:|    
plant   486 IAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRN---- 546

  Fly   379 ARGRGDKELLTERAIKQFEKITEFCE-RTTCRHKLFSDFFGDPTPD--CSGQ---CDVCKR 433
              |:|......:.|:.|.:|:.::|| :|.||.::..::||:....  |...   ||.|:|
plant   547 --GQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNPCDNCER 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RecQ5NP_729983.1 RecQ 5..447 CDD:440280 174/449 (39%)
SMC_N 658..>963 CDD:481474
RECQI1NP_187225.2 RecQ 201..603 CDD:440280 170/426 (40%)
Blue background indicates that the domain is not in the aligned region.

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