DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RecQ5 and WRN

DIOPT Version :10

Sequence 1:NP_729983.1 Gene:RecQ5 / 39594 FlyBaseID:FBgn0027375 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_000544.2 Gene:WRN / 7486 HGNCID:12791 Length:1432 Species:Homo sapiens


Alignment Length:885 Identity:239/885 - (27%)
Similarity:382/885 - (43%) Gaps:180/885 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMSENQITIVFSPLLALI 75
            ||.:||||.|| .:|.|.:...:::::|....|.||.|||||||.|.:. ..:|.:|.|||::|:
Human   540 LKMYFGHSSFK-PVQWKVIHSVLEERRDNVAVMATGYGKSLCFQYPPVY-VGKIGLVISPLISLM 602

  Fly    76 KDQIDHLTKLKVPADSLNSKMSTKERDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKH 140
            :||:..|....:||..|.|..|    :.|:.|:|..:  .:.:|:|||..:..  ..|||.|...
Human   603 EDQVLQLKMSNIPACFLGSAQS----ENVLTDIKLGK--YRIVYVTPEYCSGN--MGLLQQLEAD 659

  Fly   141 NKLAYFAVDEAHCVSQWGHDFRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPV 205
            ..:...|||||||:|:||||||..:.|||.|::....|..:|||||||..::|||.:.|.|..| 
Human   660 IGITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLRNP- 723

  Fly   206 AQFSTPSF-RKNLFYDIVYK--NSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRD 267
             |.:...| |.||:.::..|  |.::|....|...:.|.     ||:       |..|:||.:|.
Human   724 -QITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHW-----EFE-------GPTIIYCPSRK 775

  Fly   268 QVERMAIGVTKQGIGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWD 332
            ..:::...:.|..:....||||:....|.::...::|.:...:.||.:||||::|..:|.|||:.
Human   776 MTQQVTGELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYG 840

  Fly   333 VPQNVAAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTER----AI 393
            .|:::.:||||.||||||||||.|.:.:...|:...|.||            .|:..|:    .:
Human   841 APKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL------------TEIRNEKFRLYKL 893

  Fly   394 KQFEKITEFCERTTCRHKLFSDFFGDP-----------TPDCSGQCDVCKRPKKAEKALEIFHRL 447
            |...|:.::...:.||.::....|.|.           |..|   ||.|:.        .:.|..
Human   894 KMMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKC---CDNCRS--------RLDHCY 947

  Fly   448 CMDD-----------AFKSHISLQDCADLYEGGRPGIKRAAQEYAGGESGSDDDSGQSHSSMAKR 501
            .|||           |||    |....|:. |.:.||........|..|....|..:.| |:...
Human   948 SMDDSEDTSWDFGPQAFK----LLSAVDIL-GEKFGIGLPILFLRGSNSQRLADQYRRH-SLFGT 1006

  Fly   502 AKKESQDFIKQQFNLRKQISAARQLEQE-TIAQISR----VRMAEATEKKIAGLQATHREKYLTA 561
            .|.:::.:.|         :.:|||..| .:.::||    :::...|:|....|...:.|.  .:
Human  1007 GKDQTESWWK---------AFSRQLITEGFLVEVSRYNKFMKICALTKKGRNWLHKANTES--QS 1060

  Fly   562 LIDALKANVDKCKDEPGQQPKSVLKYNDYEAMSVNMEYDVFRQNKVANMYRHALVKEISTIKKLT 626
            ||  |:||.:.|       ||.:|..:.....|...|:          .|....| |:||.||..
Human  1061 LI--LQANEELC-------PKKLLLPSSKTVSSGTKEH----------CYNQVPV-ELSTEKKSN 1105

  Fly   627 EQTKLLPLLVDYIPKPETSSKGAWTGGSVAYFERKLKELEEQRPQSLKEVPKALKDRKGFKQENS 691
                 |..|..|.|..:.||     |.:::     .|.:..|.|:               |..:|
Human  1106 -----LEKLYSYKPCDKISS-----GSNIS-----KKSIMVQSPE---------------KAYSS 1140

  Fly   692 KQTSISSFFKKEIKEEPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVKEESVTPESSSSDREL 756
            .|..||:      :|:.....:..:.|..:.:..:..:..|..:|:|.:..:..           
Human  1141 SQPVISA------QEQETQIVLYGKLVEARQKHANKMDVPPAILATNKILVDMA----------- 1188

  Fly   757 ELQPDSIIGERKFKLMSNGDGSYDTHRRKRVSHETQPKEKESIKTKSSMQHLFGSFKSESEESNQ 821
            :::|.::...::...:|.|..:......:.:.|..|        |.|....||.|.|.: ||...
Human  1189 KMRPTTVENVKRIDGVSEGKAAMLAPLLEVIKHFCQ--------TNSVQTDLFSSTKPQ-EEQKT 1244

  Fly   822 SL---NGFKTARQMLEENNSKLEGVPEKLPIKD-GEKRVL 857
            ||   |...|..|.:....|..:  .:|:|:|. .|.|:|
Human  1245 SLVAKNKICTLSQSMAITYSLFQ--EKKMPLKSIAESRIL 1282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RecQ5NP_729983.1 RecQ 5..447 CDD:440280 148/453 (33%)
SMC_N 658..>963 CDD:481474 38/204 (19%)
WRNNP_000544.2 Interaction with WRNIP1. /evidence=ECO:0000250|UniProtKB:O09053 2..277
KBM 1. /evidence=ECO:0000305|PubMed:27063109 11..23
RNaseD_like 61..229 CDD:176650
PTZ00341 <156..480 CDD:173534
2 X 27 AA tandem repeats of H-L-S-P-N-D-N-E-N-D-T-S-Y-V-I-E-S-D-E-D-L-E-M-E-M-L-K 424..477
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..529
recQ_fam 538..1010 CDD:129701 165/522 (32%)
DEAH box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 668..671 2/2 (100%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:20159463 987..993 2/5 (40%)
HRDC 1156..1229 CDD:128635 11/91 (12%)
HTH_40 1258..1352 CDD:464189 7/27 (26%)
KBM 2. /evidence=ECO:0000305|PubMed:27063109 1403..1412
XLM. /evidence=ECO:0000305|PubMed:27063109 1419..1432
Blue background indicates that the domain is not in the aligned region.

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