Protein Alignment RecQ5 and rcq-5

DIOPT Version :10

• Sequence 1: NP_729983.1
• Gene: RecQ5 / 39594
• FlyBaseID: FBgn0027375
• Length: 1058
• Species: Drosophila melanogaster
• Sequence 2: NP_001309439.1
• Gene: rcq-5 / 175522
• WormBaseID: WBGene00004322
• Length: 821
• Species: Caenorhabditis elegans
• Alignment Length: 652
• Identity: 239/652 - (36%)
• Similarity: 348/652 - (53%)
• Gaps: 68/652 - (10%)

  Fly    15 FGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMSENQITIVFSPLLALIKDQI 79
            |.|.|::|.||.:|:.|.:|:|.|||||:|||:|||||:|||.:: ...||:|.|||:||:||||
 Worm   173 FCHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLPAVV-HGGITVVISPLIALMKDQI 236

  Fly    80 DHLTKLKVPADSLNSKMSTKERDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLA 144
            ..|.:..:|.::|||.::|.||.|::.:|...:..::.||:|.|..||...:.||..|...:.|.
 Worm   237 SSLKRKGIPCETLNSTLTTVERSRIMGELAKEKPTIRMLYLTAEGVATDGTKKLLNGLANRDVLR 301

  Fly   145 YFAVDEAHCVSQWGHDFRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFS 209
            |..|||||||:|||||||||||.||.||.....|.|:||||||:.:.::||..||:|..| ..|.
 Worm   302 YIVVDEAHCVTQWGHDFRPDYLTLGSLRDVCPGVPWVALTATANAKAQDDIAFQLKLRNP-ESFK 365

  Fly   210 TPSFRKNLFYDIVYKNSIED-DFQHLADFARHCL--------GNPKEFKDTPKPQR-----GCGI 260
            :.::|.|||||:..::.:.. ...|:|.|...||        .|..:.:...:.|.     |..|
 Worm   366 SGTYRDNLFYDVAMRDHLATAPENHMASFITKCLTVDAKTSSSNLTKHEKAERSQNKKTFTGSAI 430

  Fly   261 VYCRTRDQVERMAIGVTKQGIGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSV 325
            ||||:|::..::|..:...||.|:||||||...:|.||||.||..:.|::.||.:||||:|||.|
 Worm   431 VYCRSRNECGQVAKMLEIAGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMGIDKPDV 495

  Fly   326 RFVIHWDVPQNVAAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFL-------LQNDAHRARGRG 383
            |.||||...||:|.||||:|||||||.:||||:||.::|..::.||       |:..|.:....|
 Worm   496 RAVIHWSPSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKAKKNNAEG 560

  Fly   384 DKELLTERAIKQFE----KITEFCERTTCRHKLFSDFFGD-PTPDCSGQCDVCKRPKKAEKALEI 443
            :|   .|..||..:    |:.|:||...|||...:.||.| ....|...||.|:.|.|..:.:|.
 Worm   561 EK---AEMQIKSIQTGLAKMLEYCESARCRHVSIASFFDDTECRPCKTNCDYCRDPTKTIRNVEA 622

  Fly   444 FHRLCMDDAFKSHISLQDCADLYEGGRPGIKRAAQEYAGGESGSD-DDSGQSHSSMAKRA----- 502
            |   ...:|.......:..|...|.|...:      |.||:.|.: :|...|.:|.:|.|
 Worm   623 F---INSEASTGRSMFRKSASSGESGFDSV------YGGGKRGGETEDELLSAASTSKDAMDRME 678

  Fly   503 ---KKESQDFIKQQFNLRKQI-----SAARQLEQETIAQISRVRMAEATEKKIAGLQATHREKYL 559
               .|..:..|.|:|..|:|.     :.||::|..|     .|.:.:..:..|..:....||.::
 Worm   679 QEEAKRVRSVISQEFAKRRQAAPPPRATARRVEPAT-----DVNVIKPEQNVIKNVTLETRENWV 738

  Fly   560 TALIDALKANVDKCKDEPGQQPKSVLKYNDYEAMSVNMEYDVFRQNKVANMYRHALVKEISTIKK 624
            ..|..||.:|........|...|...:         .:||.::..:|....|::....:::.|||
 Worm   739 RFLHRALDSNWIVSGPPAGVTTKQCAE---------QLEYGLYSISKNETTYKNKCGHKLAEIKK 794

  Fly   625 LT 626
            ||
 Worm   795 LT 796

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RecQ5	NP_729983.1	RecQ	5..447	CDD:440280	197/457 (43%)
		SMC_N	658..>963	CDD:481474
rcq-5	NP_001309439.1	RecQ	182..617	CDD:440280	191/439 (44%)