DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9628 and Ssk

DIOPT Version :9

Sequence 1:NP_001163442.1 Gene:CG9628 / 39593 FlyBaseID:FBgn0036433 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_649184.1 Gene:Ssk / 40207 FlyBaseID:FBgn0036945 Length:162 Species:Drosophila melanogaster


Alignment Length:116 Identity:29/116 - (25%)
Similarity:51/116 - (43%) Gaps:21/116 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VASLCYVTFGALTIYTAIYLIMALF------GDLTPWRTATLWNLVAFVLFVAVTALLFRDW-ST 127
            |||...|.|   .|||..:.|...|      |:|..    |:.|:|..::::||..:....| ..
  Fly    55 VASGVMVGF---LIYTGCHTIAFAFGTTKHKGELCD----TIMNVVGCIMWIAVGGVALHYWKGY 112

  Fly   128 TKDRNYWHPNMHRLDLVMASASIALVTSLVFLLDILITLRLGVH---GDLE 175
            ..|..:.:.|..| .:.:|..|:.::...::|||.::..   :|   ||.:
  Fly   113 MSDEGFLYVNSER-QVGIAMGSLCVIEGALYLLDTVLAC---IHYSKGDTD 159



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR36692
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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