DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and DIT2

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_010690.1 Gene:DIT2 / 852011 SGDID:S000002810 Length:489 Species:Saccharomyces cerevisiae


Alignment Length:520 Identity:112/520 - (21%)
Similarity:194/520 - (37%) Gaps:117/520 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PKRIPFLGTKWIFLLFFRRYKMTKLHEVY-ADLNRQYGDIVL------EVMPSNVP-IVHLYNRD 121
            ||.||.:....:||........|:|:::| .:...:||.:..      .::.|... :..::..:
Yeast    30 PKNIPTIPFYVVFLPVIFPIDQTELYDLYIRESMEKYGAVKFFFGSRWNILVSRSEYLAQIFKDE 94

  Fly   122 DLEKVLKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNF 186
            |.........|.|:            |....|....:::..|.:|:..|:::|:.      ||:|
Yeast    95 DTFAKSGNQKKIPY------------SALAAYTGDNVISAYGAVWRNYRNAVTNG------LQHF 141

  Fly   187 LPA---LNA--VCDDFIELLRARRDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQP 246
            ..|   .||  :|    .|::.|.......:| ...|:..|.|:.:..:.||...|.|   |.:.
Yeast   142 DDAPIFKNAKILC----TLIKNRLLEGQTSIP-MGPLSQRMALDNISQVALGFDFGAL---THEK 198

  Fly   247 QKISQ-LAAAVKQLFISQRDSYYGLGLWKYFP----------TKTYRDFARAEDLIYD-VISEII 299
            ....: |....||:|..         .:..||          .|.::|.....:|:.. |..|::
Yeast   199 NAFHEHLIRIKKQIFHP---------FFLTFPFLDVLPIPSRKKAFKDVVSFRELLVKRVQDELV 254

  Fly   300 DHELEELKKSAACEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDF----------IAAGIET-- 352
            ::...|....||                   .|| ||...:.|||:          :.||.|.  
Yeast   255 NNYKFEQTTFAA-------------------SDL-IRAHNNEIIDYKQLTDNIVIILVAGHENPQ 299

  Fly   353 -LANTLLFVLSSVTGDPGAMPRILSEFCEYRDTNILQD--ALTNATYTKACIQESYRL-RPTAFC 413
             |.|:.|::|:..:.:.....|        ::.|.:.|  .|.:.....|.:.|..|: .|.:..
Yeast   300 LLFNSSLYLLAKYSNEWQEKLR--------KEVNGITDPKGLADLPLLNAFLFEVVRMYPPLSTI 356

  Fly   414 LARILEEDMELSGYSLNAGTVVLCQNMIACHKDSNFQG--AKQFTPERW---IDPATENFTVNVD 473
            :.|...:..:|....:....|.:..|......|....|  |..|.||||   |:...:|:.: ..
Yeast   357 INRCTTKTCKLGAEIVIPKGVYVGYNNFGTSHDPKTWGTTADDFKPERWGSDIETIRKNWRM-AK 420

  Fly   474 NASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDVSFVKPLETEFEFLLAPK---TPLSLRL 535
            |...|..|..|||:|.|::....|:.:.||:|:..|..|    |:.|:|..|.|.   .||:|:|
Yeast   421 NRCAVTGFHGGRRACLGEKLALTEMRISLAEMLKQFRWS----LDPEWEEKLTPAGPLCPLNLKL 481

  Fly   536  535
            Yeast   482  481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 107/508 (21%)
DIT2NP_010690.1 CYP56-like 65..485 CDD:410693 103/485 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24305
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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