DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and CYP706A6

DIOPT Version :10

Sequence 1:NP_996074.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_192969.4 Gene:CYP706A6 / 826841 AraportID:AT4G12320 Length:518 Species:Arabidopsis thaliana


Alignment Length:523 Identity:115/523 - (21%)
Similarity:206/523 - (39%) Gaps:97/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QPEAPKRRRRGIWDIPGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNV 112
            ||..|          |||:.:|.:|.    |.|..    ..||..:..|...||.|....:.|.:
plant    39 QPHLP----------PGPRGLPIVGN----LPFLD----PDLHTYFTKLAESYGPIFKLNLGSKL 85

  Fly   113 PIVHLYNRDDLEKVLKYPSKYPFR----PPTEIIVMYRQSRPDRYASVGIV-NEQGPMWQRLRSS 172
            .:|  .|...|.:.:.......|.    |.|        :|...|..:.:| ...|..|:.||..
plant    86 TVV--VNTPSLAREILKDQDINFSNHDVPLT--------ARAVTYGGLDLVWLPYGAEWRMLRKV 140

  Fly   173 LTSSITSPRVLQNFLPALNAVCDDFIELLRAR-RDPDTLVVPNFEELANLMGLEAVCTLMLGRRM 236
            ....:.|.|.|           :.|.||.|.. |:....:....:|.:.:...|.|...|:...|
plant   141 CVLKLLSHRTL-----------NSFYELRRKEIRERTRYLYQKGQEESPVNVGEQVFLTMMNLTM 194

  Fly   237 GFL-----------AIDTKQPQKISQLAAAVKQLFISQRDSYYGLGLWKYFPTKTYRDFARAEDL 290
            ..|           ::.|:..:.||::...:.:..:|.           :||.....|.   :.|
plant   195 NMLWGGSVKAEEMESVGTEFKEVISEITRLLGEPNVSD-----------FFPRLARFDL---QGL 245

  Fly   291 IYDV------ISEIIDHELEELKKSAACEDDEAAGLRSIFLNILELKD--------LDIRDKKSA 341
            :..:      :..|:|..:|:::.....:.|:.. .:....::::|||        :.:...|:.
plant   246 VKKMHVCARELDAILDRAIEQMQLLRTRDGDDGE-CKDFLQHLMKLKDQEADSEVPITVNHVKAV 309

  Fly   342 IIDFIAAGIETLANTLLFVLSSVTGDPGAMPRILSEFCEY--RDTNILQDALTNATYTKACIQES 404
            ::|.:..|.:|..||:.|.::.:...|..|.|...|..|.  :|..|.:..:|...:..|.::|:
plant   310 LVDLVVGGTDTSTNTIEFAMAELIRKPELMKRAQQELDEVVGKDNIIEESHITRLPFISAIMKET 374

  Fly   405 YRLRPTAFCLARILEEDMEL-SGYSLNAGTVVLCQNMIACHKDSN-FQGAKQFTPERWIDPATEN 467
            .||.||...|......:..| .||::...|.:.. |:.:..:|.| ::...:|.|||::|..:.:
plant   375 LRLYPTIPLLVPHRPSETALVGGYTIPKNTKIFI-NVWSIQRDPNVWEYPTEFRPERFLDKKSCD 438

  Fly   468 FTVNVDNASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFD----VSFVKPLETEFEFLLAPK 528
            || ..|.:  .:|||.|||.|.|....|..::..||.::.:||    ...:..|:.:|..:|..|
plant   439 FT-GTDYS--YLPFGSGRRICAGIALAERMILYTLATLLHSFDWKIPEGHILDLKEKFGIVLKLK 500

  Fly   529 TPL 531
            :||
plant   501 SPL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_996074.1 CYP24A1-like 98..532 CDD:410677 102/473 (22%)
CYP706A6NP_192969.4 CYP76-like 70..507 CDD:410696 102/474 (22%)

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