DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and cyp11a1

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_694485.2 Gene:cyp11a1 / 80374 ZFINID:ZDB-GENE-010306-1 Length:509 Species:Danio rerio


Alignment Length:492 Identity:124/492 - (25%)
Similarity:214/492 - (43%) Gaps:51/492 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IPGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPI---VHLYNRDDL 123
            |||..|...|..    |.|.:...:..:|.:.....:.:|.|..|    .|.|   |::...:|.
Zfish    44 IPGRWRNSLLSV----LAFTKMGGLRNVHRIMVHNFKTFGPIYRE----KVGIYDSVYIIKPEDG 100

  Fly   124 EKVLKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLP 188
            ..:.|....:|.|...:....||..|..:|   |::.::|..|:..|..|...:..|::...|:|
Zfish   101 AILFKAEGHHPNRINVDAWTAYRDYRNQKY---GVLLKEGKAWKTDRMILNKELLLPKLQGTFVP 162

  Fly   189 ALNAVCDDFI-----ELLRARRDPDT--LVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQP 246
            .|..|..||:     ::.|:.:...|  |....|:     ..||:|..::.|.|:|.| :|...|
Zfish   163 LLEEVGQDFVARVNKQIERSGQKQWTTDLTHDLFK-----FSLESVSAVLYGERLGLL-LDNIDP 221

  Fly   247 QKISQLAAAVKQLFISQRDS-YYGLGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELEELKKSA 310
            : .......|..:|.:.... |...||.:...:..:::...|.|.|::.....|.:..::.|   
Zfish   222 E-FQHFIDCVSVMFKTTSPMLYLPPGLLRSIGSNIWKNHVEAWDGIFNQADRYIQNIFKQWK--- 282

  Fly   311 ACEDDEAAGLRSIFLNILELKD-LDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMPRI 374
              |:.|..|.....|.||.::| |.|.|.|:::.:.:|.|::::..|||:.|..:...|.....:
Zfish   283 --ENPEGNGKYPGVLAILLMQDKLSIEDIKASVTELMAGGVDSVTFTLLWTLYELARQPDLQDEL 345

  Fly   375 LSEFCEYR---DTNILQDALTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAGTVVL 436
            .:|....|   ..:::| .:......||.::|:.||.|.|..|.|.:.||..:..|.:.|||:|.
Zfish   346 RAEISAARIAFKGDMVQ-MVKMIPLLKAALKETLRLHPVAMSLPRFITEDTVIQNYHIPAGTLVQ 409

  Fly   437 CQNMIACHKDSN-FQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEMEVVL 500
            . .:.|..:|.. |...:|:.|.|||....:.|.        .:.||.|.|.|.|:|..|.|:.:
Zfish   410 L-GVYAMGRDHQFFPKPEQYCPSRWISSKRQYFK--------SLGFGFGPRQCLGRRIAETEMQI 465

  Fly   501 LLAKMVLAFDVSFVKPLE--TEFEFLLAPKTPLSLRL 535
            .|..|:..|.:...|.:|  ::||.||.|:.|:.|.:
Zfish   466 FLIHMLENFRIEKQKQIEVRSKFELLLMPEKPIMLTI 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 120/482 (25%)
cyp11a1NP_694485.2 p450 66..502 CDD:278495 117/464 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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