DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and zgc:136333

DIOPT Version :10

Sequence 1:NP_996074.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_073768315.1 Gene:zgc:136333 / 723999 ZFINID:ZDB-GENE-060616-143 Length:542 Species:Danio rerio


Alignment Length:500 Identity:120/500 - (24%)
Similarity:229/500 - (45%) Gaps:57/500 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DIPGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDLEK 125
            |:|..|....|     :.:.|:.| :..:||:.....:.||.: .::...|:..:.:.:.:.||:
Zfish    73 DLPEIKIFTML-----YQMLFKGY-LNSIHELQIYQKQVYGPL-SKINSGNLQGISISSVELLEE 130

  Fly   126 VLKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPAL 190
            :|:...|||.|   ..:.::.:.|..|....|...|:|..|.:||:.|...:..|:....:...:
Zfish   131 LLRKDEKYPCR---GYMTLWTEHRDLRGIGYGPFTEEGEKWYKLRAVLNKRMLHPKDSLQYGDVV 192

  Fly   191 NAVCDDFIELLRARRD--PDTLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQPQKISQLA 253
            |||..|||:.:...|:  |...:|.|.........||.:.:::...|:|  .::.:.|.:..:..
Zfish   193 NAVITDFIKRIYYLREMSPTGDLVSNLTNELYRFSLEGIASILFETRIG--CLEKEIPVETQEFI 255

  Fly   254 AAVKQLFISQRDSYYGLGL-----W--KYFPTKTYRDFARAEDLIYDVISEIIDHELEELKKSAA 311
            .::.|:|.      |.:.:     |  .|||  .::.:....|.|:...:::||.::|.::|...
Zfish   256 NSIAQMFT------YSMHVALLPNWTRNYFP--FWQKYIDGWDGIFKFGTKMIDMKMEAIQKRVD 312

  Fly   312 CEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMPRILS 376
             .:.|.||....:|  |....:..:|...::.:.:.||::|.:||:|:.|..::.||.|...:..
Zfish   313 -TNQEVAGEYLTYL--LSSGKMSSKDVYGSVSELLLAGVDTTSNTMLWALYLLSKDPAAQETLYQ 374

  Fly   377 EFCEYRDTNILQD-------ALTNATYTKACIQESYRLRPTAFCLARILEEDMELSG--YSLNAG 432
            |.     |.:|:|       .:.:..:.||.|:|:.||.|.....:|::.|...:.|  :.....
Zfish   375 EV-----TKVLKDDRIPTAEEVNSMPFLKAVIKETLRLYPVVPVNSRLIAETEVVIGEYFFPKKT 434

  Fly   433 TVVLCQNMIACHKDSNFQGAKQFTPERWI-DPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEM 496
            |..||...|: |.:..|...::|.||||: |..|.      .|....:|||.|.|:|.|:|..|:
Zfish   435 TFNLCHYAIS-HDEKVFPEPQKFKPERWLRDGRTR------PNPFGSIPFGFGVRACVGRRIAEL 492

  Fly   497 EVVLLLAKMVLAFDV---SFVKPLETEFEFLLAPKTPLSLRLSDR 538
            |:.|.||:::..|::   ..|..::..|..:|.|...::|...:|
Zfish   493 EMHLALARLIKLFEMRPDPTVGEVKANFRSVLVPNKKVNLHFVER 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_996074.1 CYP24A1-like 98..532 CDD:410677 110/455 (24%)
zgc:136333XP_073768315.1 None

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