DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and si:dkey-91i10.3

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001116749.1 Gene:si:dkey-91i10.3 / 565876 ZFINID:ZDB-GENE-081105-124 Length:513 Species:Danio rerio


Alignment Length:503 Identity:128/503 - (25%)
Similarity:229/503 - (45%) Gaps:62/503 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DIPGPKRIPFLGTKWIFLLFFRRYKMTKLHE-------VYADL-NRQYGDIVLEVMPSNVPIVHL 117
            |:.||.   ||.:  ::.||.:.|..| .|:       :|..| ..:||.:|         ||::
Zfish    48 DLDGPS---FLTS--LYWLFGKGYFQT-THQMQIEHSKIYGPLWKSKYGPLV---------IVNV 97

  Fly   118 YNRDDLEKVLKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRV 182
            .:.|.:|:||:...::|.|........||:.|...|   |.:.|.||.|||:||.|...:..|:.
Zfish    98 ASADLIEQVLRQEGRHPIRTDMPHWRGYRKLRNHAY---GPLTEMGPEWQRIRSILNPRMLKPKH 159

  Fly   183 LQNFLPALNAVCDDFIE---LLRARRDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTK 244
            :.|:..|:|.|..||||   .|:..:..|.:|.....||.. ...|.:.:::...|||  .::.:
Zfish   160 VSNYTNAINGVVSDFIEKMAKLKTTKGNDVMVYDVAGELYK-FAFEGISSVLFETRMG--CLNDE 221

  Fly   245 QPQKISQLAAAVKQLF-ISQRDSYYGLGLWKYFPTKTYRDFARAEDLIYDVISEIIDH---ELEE 305
            .|::..:...:|.::| :|.....:...||.|.|  .::.|....|.::.|..|::..   |::|
Zfish   222 IPEETQKFIFSVGEMFRLSPIVILFPKFLWPYMP--FWKHFVAVWDHLFKVADELVQQKMTEIQE 284

  Fly   306 LKKSAACEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGA 370
            ..|:.:..:.|      ...::|..:.:...:...:|.:.:.||::|.:||:.:.|..:..:|..
Zfish   285 KVKTGSPVEGE------YLTHLLISEQMSFTEVLGSITELLLAGVDTTSNTISWALYHLAREPEI 343

  Fly   371 MPRILSEFCEY--RDTNILQDALTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAGT 433
            ..::..|....  .|.....|.:|.....||.::|:.||.|.....||::.|:..:.|..|....
Zfish   344 QQKLHEEVVSVCPGDKTPSSDDITRMPLLKAIVRETLRLYPVVPGNARVVAENEIVVGDHLFPKN 408

  Fly   434 VV--LCQNMIACHKDSNFQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEM 496
            .:  ||...:: :.::.|.....|.|:|||....:.......:    ||||.|.|:|.|:|..|:
Zfish   409 TLFHLCHFAVS-YDETVFPDPFAFLPQRWIREQKQLSQHPFGS----VPFGFGIRACLGRRVAEL 468

  Fly   497 EVVLLLAKMVLAFDV------SFVKPLETEFEFLLAPKTPLSLRLSDR 538
            |:.|||::::..::|      ..|||:.   ..||.|.|.:.|:..||
Zfish   469 EMYLLLSRLIKRYEVRPDPSGKTVKPIT---RTLLVPATSIDLQFIDR 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 122/489 (25%)
si:dkey-91i10.3NP_001116749.1 p450 52..510 CDD:278495 124/494 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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