Protein Alignment shd and Cyp313a1

DIOPT Version :10

• Sequence 1: NP_996074.1
• Gene: shd / 39592
• FlyBaseID: FBgn0003388
• Length: 540
• Species: Drosophila melanogaster
• Sequence 2: NP_650368.1
• Gene: Cyp313a1 / 41759
• FlyBaseID: FBgn0038236
• Length: 492
• Species: Drosophila melanogaster
• Alignment Length: 583
• Identity: 118/583 - (20%)
• Similarity: 197/583 - (33%)
• Gaps: 193/583 - (33%)

  Fly     1 MAVILLLALALVLGCYCALHRHKLADIYLRPLLKNTLLEDFYHAELIQPEAPKRRRRGIWDIPGP 65
            :.:.||||:..:...|....|.:|..:.|:                               ||||
  Fly     2 LTINLLLAVGALFWIYFLWSRRRLYFLMLK-------------------------------IPGP 35

  Fly    66 KRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDD--LEKVLK 128
            ..:|.||:....::.::|    ||......||: ||..:|..|.   |:..:..||.  :|.:..
  Fly    36 IGLPILGSSLENIITYKR----KLSFRTKYLNK-YGSTILTWMG---PVPFIVTRDPKVVEDIFS 92

  Fly   129 YP-----SKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSI----------- 177
            .|     |::.....|..:            ..|::.:|.|.|...|.....|.
  Fly    93 SPDCHNKSQHIVNAITSCM------------GNGLLGKQDPHWLDRRKHFNPSFKQDLLLSFFHI 145

  Fly   178 --TSPRVLQNFLPALNAVCDDFI---------ELLR--------------ARRD---PDTLVVPN 214
              ...:||.|.|       |.::         |:||              .:.|   .:..:|.:
  Fly   146 FDAETKVLMNLL-------DTYVDKGEIDVVPEMLRWSFKIAAQTTMGSEVKHDEHFKNGSLVES 203

  Fly   215 FEELANLMGLEAVCTLMLGRRMGFLAIDTKQPQKISQLAAAVKQLFISQRDSYYGLGLWKYFPTK 279
            ||.|.:...|..:..|:..|                         .||:...|
  Fly   204 FESLISHSTLNILMPLVQNR-------------------------MISKICGY------------ 231

  Fly   280 TYRDFARAEDL--IYDVISEIIDHELEELKKSAACEDDEAAGLRSIFLN-ILEL---KDLDIRDK 338
               |..||::.  |..::..:::.::..|.|:.:  |.|:    :|.:| .:||   .|:...|.
  Fly   232 ---DKLRADNFSRIQKMLDNVVNKKVNPLPKTDS--DPES----NIVINRAMELYRKGDITYMDV 287

  Fly   339 KSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMPRILSEFCEYRDTNILQDA---------LTNA 394
            ||.....||||.:|.|.|:...|..:...|.....:..|.     ..:..||         :...
  Fly   288 KSECCIMIAAGYDTSALTVYHALFLLANHPEHQEAVFEEL-----NGVFPDAGHFGITYPDMQKL 347

  Fly   395 TYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAGTVVLCQNMIACHKDSNFQGAKQFTPER 459
            .|.:..|:|:.||.|.....||..:.|:.||...|....||:..:|...|::          ||.
  Fly   348 DYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRN----------PEV 402

  Fly   460 WIDPATENFTVNVDN----------ASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDVS 512
            | .|..:||  |.||          ....:||..|:|:|.|.::..|.....|.:::..:.:|
  Fly   403 W-GPDADNF--NPDNFLAENMEQKHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKIS 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shd	NP_996074.1	CYP24A1-like	98..532	CDD:410677	98/486 (20%)
Cyp313a1	NP_650368.1	CYP313-like	66..487	CDD:410680	97/483 (20%)