DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and Cyp6g1

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001286335.1 Gene:Cyp6g1 / 36316 FlyBaseID:FBgn0025454 Length:524 Species:Drosophila melanogaster


Alignment Length:511 Identity:112/511 - (21%)
Similarity:193/511 - (37%) Gaps:112/511 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RRRGIWDIPGPKRIPFLG-TKWIFLLFFRRYKMTK-----LHEVYADLNRQYGDIVLEVMPSNVP 113
            :|:||..||   ..|.:| ||.:|       ||..     |.|:|.| .|...:.|:.:...|.|
  Fly    29 QRKGIPYIP---PTPIIGNTKVVF-------KMENSFGMHLSEIYND-PRLKDEAVVGIYSMNKP 82

  Fly   114 IVHLYNRDDLEKVL-----KYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSL 173
            .:.:.:.:.::.:|     ::.::|....|        ...|..|.::..|.:  ..|:.:|:.|
  Fly    83 GLIIRDIELIKSILIKDFNRFHNRYARCDP--------HGDPLGYNNLFFVRD--AHWKGIRTKL 137

  Fly   174 TSSITSPRVLQNFLPALNAVCDDFIELLRARRDPDT--LVVPNFEELANLMGLEAVCTLMLGRRM 236
            |...||.:|.|.: ..:..:..| :||...||....  ..:...:|:......:::.|:..|.|.
  Fly   138 TPVFTSGKVKQMY-TLMQEIGKD-LELALQRRGEKNSGSFITEIKEICAQFSTDSIATIAFGIRA 200

  Fly   237 GFLAIDTKQPQKISQ-----LAAAVKQLFIS---------QRDSYYGLGLWKYFPTKTYRDFARA 287
            ..|.....:.:...:     ..|..|..|::         .|..::         |..:..|.|:
  Fly   201 NSLENPNAEFRNYGRKMFTFTVARAKDFFVAFFLPKLVSLMRIQFF---------TADFSHFMRS 256

  Fly   288 EDLIYDVISEIIDHELEELKKSAACEDDEAAGLRSIFLNILE-----------LKDLDIRDKKSA 341
                      .|.|.:||.::|....:|    |..:.:::.:           .|:.|....::.
  Fly   257 ----------TIGHVMEERERSGLLRND----LIDVLVSLRKEAAAEPSKPHYAKNQDFLVAQAG 307

  Fly   342 IIDFIAAGIETLANTLLFVLSSVTGDPGAMPRILSEFCE---YRDTNILQDALTNATYTKACIQE 403
            :  |..||.||.::|:.|.|..:...|....|:..|..|   ....::..:.:.:..|....:.|
  Fly   308 V--FFTAGFETSSSTMSFALYEMAKHPEMQKRLRDEINEALVEGGGSLSYEKIQSLEYLAMVVDE 370

  Fly   404 SYRLRPTAFCLARILEE-----DMELS---GYSLNAGTVVLCQNMIACHKDSNF-QGAKQFTPER 459
            ..|:.|....|.|..|.     |:.|.   .|:|..||.|... :.|.|.|..: ....||.|||
  Fly   371 VLRMYPVLPFLDREYESVEGQPDLSLKPFYDYTLENGTPVFIP-IYALHHDPKYWTNPSQFDPER 434

  Fly   460 WIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDVSFVK 515
            : .||.....|    |....|||.|..:|.|.|     :.||.:|:.|   ||.:|
  Fly   435 F-SPANRKNIV----AMAYQPFGSGPHNCIGSR-----IGLLQSKLGL---VSLLK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 108/503 (21%)
Cyp6g1NP_001286335.1 p450 56..508 CDD:278495 100/474 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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