Protein Alignment shd and cyp-35B3

DIOPT Version :9

• Sequence 1: NP_001261843.1
• Gene: shd / 39592
• FlyBaseID: FBgn0003388
• Length: 540
• Species: Drosophila melanogaster
• Sequence 2: NP_504095.1
• Gene: cyp-35B3 / 187092
• WormBaseID: WBGene00019470
• Length: 499
• Species: Caenorhabditis elegans
• Alignment Length: 499
• Identity: 106/499 - (21%)
• Similarity: 202/499 - (40%)
• Gaps: 101/499 - (20%)

  Fly    63 PGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDLEKV- 126
            |||...|.:|.  |..:.:..:|...:........:.||: |..:....:|.|.:.:.:..::|
 Worm    27 PGPIAFPIIGN--IPQVAYYVWKTEGMVPALDLFRKTYGN-VFTIWLGPIPHVSICDYETSQEVF 88

  Fly   127 LKYPSKYPFR--PPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRS---------SLTSSITSP 180
            :|..:|:..|  ||..|.|.         .::|::...|..|..:|.         .:...:...
 Worm    89 VKNGNKFKDRLLPPIFIHVS---------ENLGLLTANGDSWAEMRGFTLLAFRNMGVGKDLMEK 144

  Fly   181 RVLQNFLPALNAVCDDFIELLRARRDPDTLVVPNFEELANLMGL---EAVCTLMLGRRM------ 236
            |:|..    |||.|        |..|.|.:......::::...|   ..:.:.::|:|.
 Worm   145 RILDE----LNARC--------AEIDADAVNGKTIVKISDFFDLTVGSVINSTLVGKRFEAHNKD 197

  Fly   237 GFLAIDTKQPQKISQLAAAVKQLFISQRDSYYGLGLW---KYFPTKTYRDFARAEDLIYDVISEI 298
            .||.:     :||..:::.:...|...      :.:|   .:||.:    |||:.::..:|:..:
 Worm   198 EFLHL-----KKIIHVSSDIFTTFDMT------VPVWVLKTFFPGR----FARSVEIQEEVLKYV 247

  Fly   299 IDHELEELKKSAACE----DDEAAGLRSIFLNILELKD-------LDIRDKKSAIIDFIAAGIET 352
            .....:...|....|    .::.......||..::.::       ..:|.....|.|...||.:|
 Worm   248 SREASKRYDKMKLGEYTPSSEDPQDFVEAFLAKIDQEEQTGGPTHFTMRCLNQVIADLWLAGQDT 312

  Fly   353 LANTLLFVLSSVTGDPGAMPRILSEFCE-----YRDTNILQDALTNATYTKACIQESYRLRPTAF 412
            .|.||:...:.:..:|..|.:...|..:     ||...:...|.|:  |..|.|.|..|   .|.
 Worm   313 TATTLVSGFNQLVNNPEVMRKCREEIMKITENGYRPLQLKDRAETH--YLNATIAEIQR---HAS 372

  Fly   413 CLA----RILEEDMELSGYSLNAGTVVLCQNMIACHKDSN-FQGAKQFTPERWIDPATENFTVNV 472
            .|.    |::.|...::||.::||.|:..| :.|.|.::: |:...:|.|||:|:        |.
 Worm   373 ILNVNFWRLVHEPTIVNGYEIDAGAVITSQ-LGALHVNNDIFKDPSKFYPERFIE--------NG 428

  Fly   473 DNASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDVSFVKP 516
            ...:.::|||:|:|||.|:.....|:.|::..::|.:|   :||
 Worm   429 KLLNQIIPFGIGKRSCVGENIARSELYLMIGNLLLRYD---IKP 469

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shd	NP_001261843.1	p450	63..528	CDD:299894	106/499 (21%)
cyp-35B3	NP_504095.1	p450	26..481	CDD:278495	106/499 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S4812
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.950