Protein Alignment shd and cyp-33D1

DIOPT Version :9

• Sequence 1: NP_001261843.1
• Gene: shd / 39592
• FlyBaseID: FBgn0003388
• Length: 540
• Species: Drosophila melanogaster
• Sequence 2: NP_507076.1
• Gene: cyp-33D1 / 187025
• WormBaseID: WBGene00010589
• Length: 492
• Species: Caenorhabditis elegans
• Alignment Length: 505
• Identity: 106/505 - (20%)
• Similarity: 183/505 - (36%)
• Gaps: 128/505 - (25%)

  Fly    63 PGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDL-EKV 126
            |||..:|.:|.    ||..:::.    ::::....:::|. |.....::.|.:.:.:.:.: |..
 Worm    27 PGPTPLPLVGN----LLQLQKFG----YDIFHKWKKEFGP-VFTFWLADRPFIFITSYEVMKETF 82

  Fly   127 LKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPALN 191
            :|....:..:...:|      .:.....:.|:::..|.||:..|....|.:   |.|
 Worm    83 VKDGDTFADKQLNQI------DKKKLQRNYGVLDTNGEMWREHRRFTLSQL---RDL-------- 130

  Fly   192 AVCDDFIE---LLRARRDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQPQKISQLA 253
            .:..|.::   ||.        :...|:::.:.:|.|.....:|.|.:|          .:..|.
 Worm   131 GLGKDLMQEKILLE--------IEEQFKDINSHLGEEIDLPSVLDRGVG----------NVINLT 177

  Fly   254 AAVKQLFISQRDSYYGL-----GL------WKYF------------PTKTYRDFARA--EDLIYD 293
            ...|:...:|||.:..|     ||      ::||            |..|..|..:.  |:|...
 Worm   178 LFNKRFETNQRDEFTYLKSLIDGLRDVASEFRYFIQFLVPWSSKIIPGPTLGDKTKGMKEELDVF 242

  Fly   294 VISEIIDHE-----------------LEELKKSAACEDDEAAGLRSIFLNILELKDLDIRDKKSA 341
            .:.::.:|.                 |:|.||.      ||.|....|.|         :...:.
 Worm   243 FVKQVEEHRKEIDFDTVESYDYVEAYLKEQKKR------EADGDHETFCN---------KQLYAM 292

  Fly   342 IIDFIAAGIETLANTLLFVLSSVTGDPGAMPRILSEFCEYRDTNILQDALTNAT------YTKAC 400
            ..|...||::|...||.:..|....:.....:|..|.    |..|..|.|....      |..|.
 Worm   293 CFDLWMAGLQTTTVTLTWGFSFYLHNADVQLKIREEL----DRVIGNDRLITTADKNCLPYLTAF 353

  Fly   401 IQESYR---LRPTAFCLARILEEDMELSGYSLNAGTVVLCQNMIACHKDSNFQGAKQFTPERWID 462
            |.|:.|   :.|  |.|..:...|..:.||.:..||.|:.|.......:..|..|..|.|.|:|
 Worm   354 INETQRCANIIP--FNLLHVATRDTVIEGYPVKKGTGVIAQIGTVMSDEQIFPDAHCFNPGRFI- 415

  Fly   463 PATENFTV-NVDNASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDV 511
               ||..: .||.   |:||.:|:|.|.|:....||:.|..|.:...:||
 Worm   416 ---ENGKLKKVDE---VIPFSIGKRQCLGEGLARMELFLFFANIFNRYDV 459

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shd	NP_001261843.1	p450	63..528	CDD:299894	106/505 (21%)
cyp-33D1	NP_507076.1	p450	26..482	CDD:278495	106/505 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S4812
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.950