DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and CYP27B1

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_000776.1 Gene:CYP27B1 / 1594 HGNCID:2606 Length:508 Species:Homo sapiens


Alignment Length:537 Identity:131/537 - (24%)
Similarity:222/537 - (41%) Gaps:98/537 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 YHAELIQPEAPKRRRRGIWDIPGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLE 106
            ||:          .||.:.|||||....||..      .|.:..:::|||:.......:|.:.|.
Human    30 YHS----------ARRSLADIPGPSTPSFLAE------LFCKGGLSRLHELQVQGAAHFGPVWLA 78

  Fly   107 VMPSNVPIVHLYNRDDLEKVLKY----PSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQ 167
            .. ..|..|::.....:|::|:.    |.:..|.|.||       .|..|..:.|::..:|..||
Human    79 SF-GTVRTVYVAAPALVEELLRQEGPRPERCSFSPWTE-------HRRCRQRACGLLTAEGEEWQ 135

  Fly   168 RLRSSLTSSITSPRVLQNFLPALNAVCDDFIELLRARR----DPDTLVVPNFEELAN---LMGLE 225
            ||||.|...:..|:....:...||.|..|.:..||.:|    .|..||    .::|.   ..|||
Human   136 RLRSLLAPLLLRPQAAARYAGTLNNVVCDLVRRLRRQRGRGTGPPALV----RDVAGEFYKFGLE 196

  Fly   226 AVCTLMLGRRMGFLAIDTKQPQKISQLAAAVKQLFISQRDS--------YYGLGLWKYFPTKTYR 282
            .:..::||.|:|  .::.:.|........||..:|:|...:        :...|.|    .:..|
Human   197 GIAAVLLGSRLG--CLEAQVPPDTETFIRAVGSVFVSTLLTMAMPHWLRHLVPGPW----GRLCR 255

  Fly   283 DFARAEDLIYDVISEIIDHELEELKKSAAC------EDDEAAGLRSIFLNILELKDLDIRDKKSA 341
            |        :|.:.......:|..:..||.      |.|..:|..  ..:.|..::|..:.....
Human   256 D--------WDQMFAFAQRHVERREAEAAMRNGGQPEKDLESGAH--LTHFLFREELPAQSILGN 310

  Fly   342 IIDFIAAGIETLANTLLFVLSSVTGDPGAMPRILSEF--------CEYRDTNILQDALTNATYTK 398
            :.:.:.||::|::|||.:.|..::..|.....:.||.        ..|....:    |:.....|
Human   311 VTELLLAGVDTVSNTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATV----LSQLPLLK 371

  Fly   399 ACIQESYRLRPTAFCLARILEEDMELSGYSLNAGTVV-LCQNMIACHKD-SNFQGAKQFTPERWI 461
            |.::|..||.|.....:|:.::|:.:..|.:...|:| ||.  .|..:| :.|.....|.|.||:
Human   372 AVVKEVLRLYPVVPGNSRVPDKDIHVGDYIIPKNTLVTLCH--YATSRDPAQFPEPNSFRPARWL 434

  Fly   462 --DPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDVS---FVKPLETEF 521
              .|....|      ||:  |||.|:|||.|:|..|:|:.:.||:::..|:|.   ...|:..:.
Human   435 GEGPTPHPF------ASL--PFGFGKRSCMGRRLAELELQMALAQILTHFEVQPEPGAAPVRPKT 491

  Fly   522 EFLLAPKTPLSLRLSDR 538
            ..:|.|:..::|:..||
Human   492 RTVLVPERSINLQFLDR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 121/504 (24%)
CYP27B1NP_000776.1 p450 41..505 CDD:278495 123/511 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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