DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and CYP24A1

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_000773.2 Gene:CYP24A1 / 1591 HGNCID:2602 Length:514 Species:Homo sapiens


Alignment Length:499 Identity:129/499 - (25%)
Similarity:222/499 - (44%) Gaps:64/499 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IPGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDLEKV 126
            :|||...|.||:   .|....:..:.|.|:...:.:::||.| ..:...:...|||.:...||.:
Human    58 LPGPTSWPLLGS---LLQILWKGGLKKQHDTLVEYHKKYGKI-FRMKLGSFESVHLGSPCLLEAL 118

  Fly   127 LKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSP----------- 180
            .:..|.||.|...:....||..|.:.|   |::..:|..|||:||:....:..|           
Human   119 YRTESAYPQRLEIKPWKAYRDYRKEGY---GLLILEGEDWQRVRSAFQKKLMKPGEVMKLDNKIN 180

  Fly   181 RVLQNFLPALNAVCDDFIELLRARRDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQ 245
            .||.:|:..::.:||:       |...:.|    :.|| |....|::|.::..:|.|.|  ....
Human   181 EVLADFMGRIDELCDE-------RGHVEDL----YSEL-NKWSFESICLVLYEKRFGLL--QKNA 231

  Fly   246 PQKISQLAAAVKQLFISQRDSYYG------LGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELE 304
            ..:......|:|.:.     |.:|      :.|.|...||.::|...|.|.|:..:...||:.||
Human   232 GDEAVNFIMAIKTMM-----STFGRMMVTPVELHKSLNTKVWQDHTLAWDTIFKSVKACIDNRLE 291

  Fly   305 ELKKSAACEDDEAAGLRSIFL-NILELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDP 368
            :..:..:.:          || :|.....|..::..:|:.:...|.:||.||:|:::|.:::.:|
Human   292 KYSQQPSAD----------FLCDIYHQNRLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNP 346

  Fly   369 GAMPRILSEFCEYRDTNILQDA--LTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNA 431
            ....::|.|.......|.:..|  |.|..|.|||::||.||.|:.....|.|::...|..|:|..
Human   347 QVQQKLLKEIQSVLPENQVPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKATVLGEYALPK 411

  Fly   432 GTVVLCQNMIACHKDSNFQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEM 496
            |||::....:....:.||:.:.||.||||:....:      .|....:|||||:|.|.|:|..|:
Human   412 GTVLMLNTQVLGSSEDNFEDSSQFRPERWLQEKEK------INPFAHLPFGVGKRMCIGRRLAEL 470

  Fly   497 EVVLLLAKMVLAFDVSFV--KPLETEFEFLLAPKTPLSLRLSDR 538
            ::.|.|..:|..:|:...  :|:|......|.|...|.:....|
Human   471 QLHLALCWIVRKYDIQATDNEPVEMLHSGTLVPSRELPIAFCQR 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 126/486 (26%)
CYP24A1NP_000773.2 p450 59..512 CDD:278495 128/494 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4812
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.770

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