DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and Cyp11b2

DIOPT Version :10

Sequence 1:NP_996074.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_034121.4 Gene:Cyp11b2 / 13072 MGIID:88584 Length:500 Species:Mus musculus


Alignment Length:490 Identity:117/490 - (23%)
Similarity:211/490 - (43%) Gaps:56/490 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PKRI-PFLG------TKWIFLL-FFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRD 121
            ||.: ||..      .||:.:: ..|......||.....:.|:.|.|....: ....||.:...:
Mouse    32 PKTLQPFEAIPQYSRNKWLKMIQILREQGQENLHLEMHQVFRELGPIFRHSV-GKTQIVSVMLPE 95

  Fly   122 DLEKVLKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNF 186
            |.||:.:..|..|.|...|..|.:|:.|..|.   |:....||.|:..|..|..::.||:.:|.|
Mouse    96 DAEKLHQVESMLPRRMHLEPWVAHRELRGLRR---GVFLLNGPEWRLNRLRLNRNVLSPKAVQKF 157

  Fly   187 LPALNAVCDDFIELLRAR-----RDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQP 246
            :|.::.|..||:|.|:.:     |...|:.|.  :.|.|.. :||....:.|.|:|.|..|. .|
Mouse   158 VPMVDMVARDFLETLKEKVLQNARGSLTMDVQ--QSLFNYT-IEASNFALFGERLGLLGHDL-SP 218

  Fly   247 QKI-------SQLAAAVKQLFISQRDSYYGLGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELE 304
            ..:       |...:..:.||:.:       .|.::..|:.:::...|.|:|.:..:..|....:
Mouse   219 GSLKFIHALHSMFKSTSQLLFLPK-------SLTRWTSTRVWKEHFDAWDVISEYANRCIWKVHQ 276

  Fly   305 ELKKSAACEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPG 369
            ||:..:      :.....|...::....|.:...|:..::..|..::|.|..|:..|..:..:|.
Mouse   277 ELRLGS------SQTYSGIVAELISQGSLPLDAIKANSMELTAGSVDTTAIPLVMTLFELARNPD 335

  Fly   370 AMPRILSEFCEYRDTNIL---QDALTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNA 431
            ....:..|... .:.:|.   |.|:::....:|.::|:.||.|....|.|||..|:.|..|.:.|
Mouse   336 VQKALRQESLA-AEASIAANPQKAMSDLPLLRAALKETLRLYPVGGFLERILSSDLVLQNYHVPA 399

  Fly   432 GTVVLCQNMIACHKDSNFQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEM 496
            ||:||..........:.|...:::.|:||:: ...:|.        .:.||.|.|.|.|:|..|:
Mouse   400 GTLVLLYLYSMGRNPAVFPRPERYMPQRWLE-RKRSFQ--------HLAFGFGVRQCLGRRLAEV 455

  Fly   497 EVVLLLAKMVLAFDVSFVK--PLETEFEFLLAPKT 529
            |::|||..::..|.|..::  .::..:.|:|.|.:
Mouse   456 EMMLLLHHILKTFQVETLRQEDVQMAYRFVLMPSS 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_996074.1 CYP24A1-like 98..532 CDD:410677 108/449 (24%)
Cyp11b2NP_034121.4 cytochrome_P450 72..496 CDD:477761 108/450 (24%)

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