DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and Cyp11a1

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_062753.3 Gene:Cyp11a1 / 13070 MGIID:88582 Length:526 Species:Mus musculus


Alignment Length:503 Identity:119/503 - (23%)
Similarity:214/503 - (42%) Gaps:70/503 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RGIWDIPGPKRIPFLGTKWIFLLFFRRYKMT-KLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNR 120
            |...:||.|.     ...|:.|..|.|...| |:|.......::||.|..|.: ..:..|::.:.
Mouse    43 RSFNEIPSPG-----DNGWLNLYHFWRESGTQKIHYHQMQSFQKYGPIYREKL-GTLESVYIVDP 101

  Fly   121 DDLEKVLKYPSKYPFR---PPTEIIVMYRQ--SRPDRYASVGIVNEQGPMWQRLRSSLTSSITSP 180
            .|...:.......|.|   ||.   |.|.|  .||     :|::.:....|::.|..|...:.:|
Mouse   102 KDASILFSCEGPNPERFLVPPW---VAYHQYYQRP-----IGVLFKSSDAWKKDRIVLNQEVMAP 158

  Fly   181 RVLQNFLPALNAVCDDFIELLRARRDPDTLVVPNFEELANLMGL----------EAVCTLMLGRR 235
            ..::||:|.|..|..|||::|..|...        :...|..|:          |::.:::.|.|
Mouse   159 GAIKNFVPLLEGVAQDFIKVLHRRIKQ--------QNSGNFSGVISDDLFRFSFESISSVIFGER 215

  Fly   236 MGFL--AIDTKQPQKISQLAAAVKQLFISQRDSYYGLGL----WKYFPTKTYRDFARAEDLIYDV 294
            ||.|  .:|.:..:.|:    ||.|:|   ..|...|.|    ::...|||::|.|.|.|:|::.
Mouse   216 MGMLEEIVDPEAQRFIN----AVYQMF---HTSVPMLNLPPDFFRLLRTKTWKDHAAAWDVIFNK 273

  Fly   295 ISEIIDHELEELKKSAACEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDFIAAGIETLANTLLF 359
            ..|...:...:|::..     :.:....:..::|....|..::.::.|.:.:|.|::|.:.||.:
Mouse   274 ADEYTQNFYWDLRQKR-----DFSQYPGVLYSLLGGNKLPFKNIQANITEMLAGGVDTTSMTLQW 333

  Fly   360 VLSSVTGDPGAMPRILSEFCEYR--DTNILQDALTNATYTKACIQESYRLRPTAFCLARILEEDM 422
            .|..:..:......:.:|....|  ....:...:......||.|:|:.||.|.:..|.|....|:
Mouse   334 NLYEMAHNLKVQEMLRAEVLAARRQAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYTVNDL 398

  Fly   423 ELSGYSLNAGTVVLCQNMIACHKDSNFQGAKQFTPERWIDPA--TENFTVNVDNASIVVPFGVGR 485
            .|..|.:.|.|:|...:.........|....:|.|.||::.:  |.:|.        .:.||.|.
Mouse   399 VLRNYKIPAKTLVQVASFAMGRDPGFFPNPNKFDPTRWLEKSQNTTHFR--------YLGFGWGV 455

  Fly   486 RSCPGKRFVEMEVVLLLAKMVLAF--DVSFVKPLETEFEFLLAPKTPL 531
            |.|.|:|..|:|:.:||..::..|  :|..::.:.|:|..:|.|:.|:
Mouse   456 RQCLGRRIAELEMTILLINLLENFRIEVQNLRDVGTKFSLILMPENPI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 115/492 (23%)
Cyp11a1NP_062753.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..49 1/5 (20%)
p450 49..507 CDD:278495 117/497 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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