DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and LOC101731070

DIOPT Version :9

Sequence 1:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_031760322.1 Gene:LOC101731070 / 101731070 -ID:- Length:517 Species:Xenopus tropicalis


Alignment Length:490 Identity:121/490 - (24%)
Similarity:199/490 - (40%) Gaps:61/490 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KRIPFLG-TKWIFLL-FFRRYKMTKLHEVYADLNRQYGDIVLEVM--PSNVPIVHLYNRDDLEKV 126
            |.||..| ..|..|. :::.....:||.|.....:..|.|..|.:  .|:|.|:|   ..|:.::
 Frog    56 KSIPCTGRNAWANLARYWKNNSFQQLHLVMEGHFQNLGPIYRETLGTHSSVNIIH---PQDVARL 117

  Fly   127 LKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPALN 191
            .:....:|.|...|....:|..|..:   .|:....|..|:..|..|...:.|...::.|||.|:
 Frog   118 FQSEGVFPRRMGIEAWAAHRDLRNHK---CGVFLLNGEDWRSDRLILNKEVLSLTGVKKFLPFLD 179

  Fly   192 AVCDDFIELLRARRDPD---TLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQPQKIS-QL 252
            .|.:||:..|..|.:.:   ||.|..:.:|.... :||...::.|:|:|.|   .:.|.:.| :.
 Frog   180 EVANDFVSFLMRRINKNTRGTLTVDLYADLFRFT-MEASGYVLYGQRLGLL---EEHPNEDSLRF 240

  Fly   253 AAAVKQLFISQRDSYY---------GLGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELEELKK 308
            ..||:.:..:.....|         ...||        .....|.|:|:......|.:..:|.  
 Frog   241 IRAVETMIKTTLPLVYLPHQLLRLTDSALW--------TQHMEAWDVIFQQADRCIQNIYQEF-- 295

  Fly   309 SAACEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMPR 373
               |...| .|...|...:|...:|.:....:.:.:.:|.|::|.|..|||.|..:..:|.....
 Frog   296 ---CLGQE-RGYSGIMAELLLQGELPLDSITANVTELMAGGVDTTAMPLLFTLFELARNPSVQQE 356

  Fly   374 ILSEF------CEYRDTNILQDALTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAG 432
            :.:|.      |. :|.|.|   |.:....|..|:|:.||.|....:.|...:|:.|..|.:.||
 Frog   357 LRAEIKRAEGQCP-KDMNQL---LNSMPLLKGAIKETLRLYPVGITVQRYPMKDIVLQNYHIPAG 417

  Fly   433 TVVLCQNMIACHKDSNFQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEME 497
            |:|.............||...::.|.||:.....||.        .:.||.|.|.|.|:|..|.|
 Frog   418 TLVQVGLYPMGRSSELFQNPLRYDPTRWMRRDETNFK--------ALAFGFGSRQCIGRRIAETE 474

  Fly   498 VVLLLAKMVLAFDVSFV--KPLETEFEFLLAPKTP 530
            ::|.|..|:..|.::.|  ..::|.|.|:|.|:.|
 Frog   475 MMLFLMHMIKNFQINTVCKDDIKTVFRFILMPEKP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_001261843.1 p450 63..528 CDD:299894 119/486 (24%)
LOC101731070XP_031760322.1 CYP11B 89..514 CDD:410737 112/457 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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