DRSC/TRiP Functional Genomics Resources

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Protein Alignment shd and LOC101731070

DIOPT Version :10

Sequence 1:NP_996074.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_031760322.1 Gene:LOC101731070 / 101731070 XenbaseID:XB-GENE-29085071 Length:517 Species:Xenopus tropicalis


Alignment Length:490 Identity:121/490 - (24%)
Similarity:199/490 - (40%) Gaps:61/490 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KRIPFLG-TKWIFLL-FFRRYKMTKLHEVYADLNRQYGDIVLEVM--PSNVPIVHLYNRDDLEKV 126
            |.||..| ..|..|. :::.....:||.|.....:..|.|..|.:  .|:|.|:|   ..|:.::
 Frog    56 KSIPCTGRNAWANLARYWKNNSFQQLHLVMEGHFQNLGPIYRETLGTHSSVNIIH---PQDVARL 117

  Fly   127 LKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPALN 191
            .:....:|.|...|....:|..|..:   .|:....|..|:..|..|...:.|...::.|||.|:
 Frog   118 FQSEGVFPRRMGIEAWAAHRDLRNHK---CGVFLLNGEDWRSDRLILNKEVLSLTGVKKFLPFLD 179

  Fly   192 AVCDDFIELLRARRDPD---TLVVPNFEELANLMGLEAVCTLMLGRRMGFLAIDTKQPQKIS-QL 252
            .|.:||:..|..|.:.:   ||.|..:.:|.... :||...::.|:|:|.|   .:.|.:.| :.
 Frog   180 EVANDFVSFLMRRINKNTRGTLTVDLYADLFRFT-MEASGYVLYGQRLGLL---EEHPNEDSLRF 240

  Fly   253 AAAVKQLFISQRDSYY---------GLGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELEELKK 308
            ..||:.:..:.....|         ...||        .....|.|:|:......|.:..:|.  
 Frog   241 IRAVETMIKTTLPLVYLPHQLLRLTDSALW--------TQHMEAWDVIFQQADRCIQNIYQEF-- 295

  Fly   309 SAACEDDEAAGLRSIFLNILELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMPR 373
               |...| .|...|...:|...:|.:....:.:.:.:|.|::|.|..|||.|..:..:|.....
 Frog   296 ---CLGQE-RGYSGIMAELLLQGELPLDSITANVTELMAGGVDTTAMPLLFTLFELARNPSVQQE 356

  Fly   374 ILSEF------CEYRDTNILQDALTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAG 432
            :.:|.      |. :|.|.|   |.:....|..|:|:.||.|....:.|...:|:.|..|.:.||
 Frog   357 LRAEIKRAEGQCP-KDMNQL---LNSMPLLKGAIKETLRLYPVGITVQRYPMKDIVLQNYHIPAG 417

  Fly   433 TVVLCQNMIACHKDSNFQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEME 497
            |:|.............||...::.|.||:.....||.        .:.||.|.|.|.|:|..|.|
 Frog   418 TLVQVGLYPMGRSSELFQNPLRYDPTRWMRRDETNFK--------ALAFGFGSRQCIGRRIAETE 474

  Fly   498 VVLLLAKMVLAFDVSFV--KPLETEFEFLLAPKTP 530
            ::|.|..|:..|.::.|  ..::|.|.|:|.|:.|
 Frog   475 MMLFLMHMIKNFQINTVCKDDIKTVFRFILMPEKP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shdNP_996074.1 CYP24A1-like 98..532 CDD:410677 112/456 (25%)
LOC101731070XP_031760322.1 CYP11B 89..514 CDD:410737 112/457 (25%)

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