DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbs-70E and homezb

DIOPT Version :10

Sequence 1:NP_648708.2 Gene:Gbs-70E / 39588 FlyBaseID:FBgn0036428 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001124256.1 Gene:homezb / 566226 ZFINID:ZDB-GENE-030131-9225 Length:718 Species:Danio rerio


Alignment Length:266 Identity:60/266 - (22%)
Similarity:92/266 - (34%) Gaps:79/266 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SGHPRQSLNYNDEPNRASRYC------RPQV-ITLASKAMVNNASAAVQGQGPSQQKAGATPLGV 80
            :.||..||            |      ||.| :|...|.::...:.:|.|....:.|. .||.|.
Zfish    58 AAHPVTSL------------CSSAMSERPNVNVTRPHKTVLGPDTPSVNGDLGKRNKP-ITPEGS 109

  Fly    81 GSRS---------------GRSYLERMASAPLLTNQPKSCLSRKSCLHKSQNTTASSADLSPTDT 130
            .|.|               .|...|:|..:|    .|:...|....|.:.::..:|.....||.|
Zfish   110 ESASLQTPDDLNETSSSTEAREQEEKMDDSP----SPEGTQSSSPELPQEKSPCSSGVQKRPTVT 170

  Fly   131 DVADSASH---SCICSKDSDSNGEVSRGPKKHVIFADDEGL-SLTEVRVMSEPSNVPPYWSMKFL 191
              :.:::|   :.:|..      .||.|.|  :|:...|.: .|..|..:.|..|..||.:.:..
Zfish   171 --SGTSTHNQVNLVCLP------LVSEGLK--LIWVRSEQVHELDAVSELVEAFNSFPYPTSQEA 225

  Fly   192 EQITQGLVSPHPPDQ---------------WTVDFKQPASDYLSFRQK---IERDFVSLENVIVK 238
            ..:.:....  ||||               |..|      |....|:|   |::...|.|.|.:.
Zfish   226 SALARKCAL--PPDQVKAWFMMQRVRYGISWADD------DIQETRRKLWHIQKKATSDECVEID 282

  Fly   239 DEESIV 244
            |||..|
Zfish   283 DEEDCV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-70ENP_648708.2 PBD_PPP1R3 <136..198 CDD:455118 14/65 (22%)
CBM_21 224..332 CDD:427265 9/24 (38%)
homezbNP_001124256.1 PHA03307 11..>175 CDD:223039 29/135 (21%)
homeodomain 205..254 CDD:238039 9/50 (18%)
homeodomain 428..480 CDD:238039
homeodomain 589..643 CDD:238039
Blue background indicates that the domain is not in the aligned region.

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