DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbs-70E and ppp1r3b

DIOPT Version :10

Sequence 1:NP_648708.2 Gene:Gbs-70E / 39588 FlyBaseID:FBgn0036428 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_005161204.2 Gene:ppp1r3b / 327285 ZFINID:ZDB-GENE-030131-5496 Length:308 Species:Danio rerio


Alignment Length:307 Identity:107/307 - (34%)
Similarity:149/307 - (48%) Gaps:87/307 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SAPLLTNQPKSCLSRKSCLHKSQNTTASSADLSPTDTDVADSASHSCICSKDSDSNGEVSRG--- 155
            |.||   ||        ||::.|::..|.:.|                 .:.|:.|| |||.   
Zfish    40 SGPL---QP--------CLNQCQSSKISFSSL-----------------KEQSEFNG-VSRALMI 75

  Fly   156 ---PKKHVIFADDEGLSLTEVRVMSE-------PSNVPPYWSMKFLEQITQGLVSPHPPDQWTVD 210
               .||||.|||.:||:||.|::.||       |.|:..::        |..|......|:.|:|
Zfish    76 PGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFF--------TSSLTVSEGKDKLTLD 132

  Fly   211 FKQPASDYLSFRQKIERDFVSLENVIVKDEESIVVGTIKVKNIDFQKEIIVRVTWDDWKSQQDIF 275
            |:||::|||.|||:||.|.|.||:.::|  |..::||:|||||.|:|.:.:|:|:|.||:..|:.
Zfish   133 FEQPSADYLKFRQRIENDHVCLEHCMLK--EKSIMGTVKVKNISFEKSVKLRITFDTWKNHTDVE 195

  Fly   276 CTYARAYGPATCAHVVFDTFSFKITLP---PSSKRLEFCICYRTNETEYWDNNDGKNYTISKRSP 337
            |.|.:    .|......|||||:.:||   ||.:|:||.|||..|....||||.||||.|.:   
Zfish   196 CQYVK----DTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQ--- 253

  Fly   338 FYYNALSPYDKGQNRNSSQQIRSTLTDALAKVQDQNGWHQEPHTPYW 384
               :||        |.||              .:.||.||:.....|
Zfish   254 ---SAL--------RKSS--------------NESNGGHQQYSQSDW 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-70ENP_648708.2 PBD_PPP1R3 <136..198 CDD:455118 23/74 (31%)
CBM_21 224..332 CDD:427265 50/110 (45%)
ppp1r3bXP_005161204.2 None

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