DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbs-70E and H18N23.2

DIOPT Version :10

Sequence 1:NP_648708.2 Gene:Gbs-70E / 39588 FlyBaseID:FBgn0036428 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_741955.2 Gene:H18N23.2 / 181788 WormBaseID:WBGene00019211 Length:368 Species:Caenorhabditis elegans


Alignment Length:382 Identity:117/382 - (30%)
Similarity:167/382 - (43%) Gaps:78/382 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ITLASKAMVNNASAAVQGQGPSQQKAGATP------------LGVGSRSGRSYLERMASAPLLTN 100
            :|.|...|.......|....|..::|.:.|            |.|.|:|....|.:|....:...
 Worm    20 LTRAPMEMGRERECCVLSTSPGCRRAASFPFVGDSSIIQASSLKVRSKSESEALNKMRLTQMNLE 84

  Fly   101 QPKSCLSRKSCLHKSQNTTASSADLSPTDTDVADSASHSCICSKDSDSNGEVSRGP--------- 156
            ..:..||..:...|.:.:...|...|.::.:|.|.   ...|:           ||         
 Worm    85 TVRKRLSESTIKEKDEGSDYQSHSSSSSECEVDDL---ELFCA-----------GPLELKEEEKL 135

  Fly   157 KKHVIFADDEGLSLTEVRVMSEPSNVPPYWSMKFLEQI------TQGLVSPHPPDQWTVDFKQPA 215
            :|.|.||||.|..|..|||.:||||.||..|...|.:.      .:.:.:..|...|.:.|||||
 Worm   136 RKSVRFADDCGHELYMVRVATEPSNCPPKLSPSVLRRYRGESFEEEEMTTREPAPVWNLMFKQPA 200

  Fly   216 SDYLSFRQKIERDFVSLENVIVKDEESIVVGTIKVKNIDFQKEIIVRVTWDDWKSQQDIFCTYAR 280
            :||:.||:.:|.:.|||||||:.:|...|:|||||.||.|:|.:.||.|.:.|.|..|    .|.
 Worm   201 ADYVRFRENMETNKVSLENVILNNEAYKVMGTIKVGNIAFEKSVFVRYTMNGWISYMD----KAA 261

  Fly   281 AYGPATCAHVVFDTFSFKITLPPSSKR---LEFCICYRTNETEYWDNNDGKNYTISKRSPFYYNA 342
            .|.|:|..  :.|||.|.:.||.|.::   :|||||::.|.|||||:|.|.||.:.         
 Worm   262 IYQPSTSK--IQDTFKFDLDLPSSVEKIHQIEFCICFKANGTEYWDSNSGTNYVLH--------- 315

  Fly   343 LSPYDKGQNRNSSQQIRSTL--------TDALAKVQDQNGWHQ-------EPHTPYW 384
               .::.|:....||.|::|        .|...|: |.|.|.:       ....|||
 Worm   316 ---CEQQQHPAVPQQRRASLFGSSKYLDRDDAYKL-DYNDWGKFASWKALSTDGPYW 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-70ENP_648708.2 PBD_PPP1R3 <136..198 CDD:455118 22/76 (29%)
CBM_21 224..332 CDD:427265 51/110 (46%)
H18N23.2NP_741955.2 CBM_21 209..314 CDD:427265 51/110 (46%)

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