DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mpcp2 and CG1907

DIOPT Version :9

Sequence 1:NP_001246757.1 Gene:Mpcp2 / 39587 FlyBaseID:FBgn0026409 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster


Alignment Length:304 Identity:74/304 - (24%)
Similarity:127/304 - (41%) Gaps:50/304 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GGILSCGTTHTFVVPLDLVKCRLQVDQA-----KYKNLVHGFKVTVAEEGARGLAKGWFPTLLGY 127
            ||:...|.| ..|.||||||.|:|:..|     :|::.:|..:..|::||...|.:|....||..
  Fly    24 GGLSGMGAT-MVVQPLDLVKTRMQISGAGSGKKEYRSSLHCIQTIVSKEGPLALYQGIGAALLRQ 87

  Fly   128 SAQGLCKFGLY----ELFKVKYAEIIGEENAYLYRTSLYLAASASAEFFADIALAPFEAAKVKIQ 188
            :.....:.|:|    :||:.|:....|..::....|    .|.|...|..    .|.|.|.|::.
  Fly    88 ATYTTGRLGMYTYLNDLFREKF
QRSPGITDSMAMGT----IAGACGAFIG----TPAEVALVRMT 144

  Fly   189 T---IP-----GYANNFREAVPKMLKEEGVNAFYKGLVPLWMRQIPYTMMKFACFERTVELLYKY 245
            :   :|     .| .|...|:.::.:|||:.|.::|.:|...|.:...|.:.|.:.:     :|.
  Fly   145 SDGRLPVAERRNY-TNVANALARITREEGLTALWRGSLPTVGRAMVVNMTQLASYSQ-----FKT 203

  Fly   246 VVPKPRADCTKGEQLIVTFAAGYIAGVFCAVVSHPADVVVSKLNQAKGASA-----------ISV 299
            ..........:|.:|  .|.|..::|:...:.|.|.|:..:::...|....           :.|
  Fly   204 YFRHGPLQMEEGIKL--HFCASMLSGLLTTITSMPLDIAKTRIQNMKMVDGKPEYRGTADVLLRV 266

  Fly   300 AKSLGFSGMWNGLTPRIIMIGTLTALQWFIYDGV-----KVALG 338
            |:..|...:|.|.||....:|..|.|.:.|.:.:     |..||
  Fly   267 ARQEGVFALWKGFTPYYCRLGPHTVLTFIILEQLNQGYNKYVLG 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp2NP_001246757.1 Mito_carr 58..142 CDD:278578 26/82 (32%)
Mito_carr <175..245 CDD:278578 17/77 (22%)
Mito_carr 260..338 CDD:278578 20/93 (22%)
CG1907NP_651703.1 Mito_carr 16..109 CDD:278578 27/85 (32%)
Mito_carr 118..207 CDD:278578 22/102 (22%)
Mito_carr 219..307 CDD:278578 18/87 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441822
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.