DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mpcp2 and sea

DIOPT Version :9

Sequence 1:NP_001246757.1 Gene:Mpcp2 / 39587 FlyBaseID:FBgn0026409 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster


Alignment Length:332 Identity:91/332 - (27%)
Similarity:139/332 - (41%) Gaps:55/332 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AAAPVVEP---QPVEGRQIAAAATPVANQQDSCEFGSTKYFALCGI-GGILSCGTTHTFVVPLDL 85
            |.|.:|.|   :|......||||       ||.:.| .|.....|| |||..|.|     .|.:.
  Fly     5 AFASLVSPYRRRPWMTEHGAAAA-------DSGQVG-LKGIVAGGITGGIEICIT-----YPTEY 56

  Fly    86 VKCRLQVDQ----AKYKNLVHGFKVTVAEEGARGLAKGWFPTLLGYSAQGLCKFGLYELFKVKYA 146
            ||.:||:|:    .||..:....|.||.|.|..||.:|....:.|...:...:||.:|..|....
  Fly    57 VKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAV 121

  Fly   147 EIIGEENAYLYRTSLYLAASASAEFFADIALAPFEAAKVKIQTIPGYANNFREAVPK-------- 203
            :..|:    |..:...|....:....|.:|:.|.|..|||      :.|:.|...||        
  Fly   122 DSRGQ----LSNSGKLLCGLGAGVCEAIVAVTPMETIKVK------FINDQRSGNPKFRGFAHGV 176

  Fly   204 --MLKEEGVNAFYKGLVPLWMRQIPYTMMKFACFERTVELLYKYVVPKPRADCTKGEQLIVTFAA 266
              ::|.||::..||||.|..::|.....::|...| :::.|||      ..|.||....:|....
  Fly   177 GQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLE-SLKDLYK------GDDHTKPVPKLVVGVF 234

  Fly   267 GYIAGVFCAVVSHPADVVVSKLNQAKGAS-------AISVAKSLGFSGMWNGLTPRIIMIGTLTA 324
            |.|||......:.|.|||.:::...:.:.       |:.:.|:.|.:..:.|..||:..:....|
  Fly   235 GAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGPAAFYKGTVPRLGRVCLDVA 299

  Fly   325 LQWFIYD 331
            :.:.|||
  Fly   300 ITFMIYD 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp2NP_001246757.1 Mito_carr 58..142 CDD:278578 28/88 (32%)
Mito_carr <175..245 CDD:278578 23/79 (29%)
Mito_carr 260..338 CDD:278578 19/79 (24%)
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 76/289 (26%)
Mito_carr 34..117 CDD:278578 28/87 (32%)
Mito_carr 125..220 CDD:278578 28/111 (25%)
Mito_carr 235..314 CDD:278578 18/72 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441824
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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