DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mpcp2 and MME1

DIOPT Version :10

Sequence 1:NP_524069.2 Gene:Mpcp2 / 39587 FlyBaseID:FBgn0026409 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster


Alignment Length:307 Identity:74/307 - (24%)
Similarity:119/307 - (38%) Gaps:61/307 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KYFALCGIGGILSCGTTHTFVVPLDLVKCRLQV-------DQAKYKNLVHGFKVTVAEEGARGLA 117
            |.|...|:||:.:....|    |||.:|.|||.       ...:||.::.....|...||.||..
  Fly    16 KSFIAGGVGGMCNVLVGH----PLDTIKVRLQTMPTPPPGQPPRYKGVIDCAARTFRYEGFRGFY 76

  Fly   118 KGWFPTLLGYSAQGLCKFGLY----ELF------KVKYAEIIGEENAYLYRTSLYLAASASAEFF 172
            :|....|:|.:......|.:|    .||      ::.|.:|              .||.|.|...
  Fly    77 RGISAPLVGVTPIYAVDFAVYAAGKRLFQTDDHIRLTYPQI--------------FAAGALAGVC 127

  Fly   173 ADIALAPFEAAKVKIQTI-----PGYANNFREAVPKMLKEEGVNAFYKGLVPLWMRQIPYTMMKF 232
            :.:...|.:..||.:||.     |...|...:...|:.::.|:.:.:||.....:|..| |...|
  Fly   128 SALVTVPTDRIKVLLQTQTVSNGPLLYNGTIDTAAKLYRQGGIRSLFKGTCACILRDSP-TGFYF 191

  Fly   233 ACFERTVELLYKYVVPKPRADCTKGE-QLIVTFAAGYIAGVFCAVVSHPADVVVSKLNQAKGAS- 295
            ..:|...||        .|.....|: ....|..:|..||:....::.|.||:.|:|..|...: 
  Fly   192 VTYEFLQEL--------ARKKSANGKISTTSTILSGGTAGIVFWTLAVPFDVLKSRLQSAPEGTY 248

  Fly   296 ---AISVAKSL----GFSGMWNGLTPRIIMIGTLTALQWFIYDGVKV 335
               ..||.::|    |...::.|:.|.::.....||..:|   ||::
  Fly   249 KHGIRSVFRNLMATEGPKALFRGILPILLRAFPSTAAVFF---GVEL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp2NP_524069.2 Mito_carr 58..142 CDD:395101 27/98 (28%)
Mito_carr <175..245 CDD:395101 18/74 (24%)
Mito_carr 260..338 CDD:395101 21/84 (25%)
MME1NP_609093.1 Mito_carr 10..107 CDD:395101 27/94 (29%)
Mito_carr 111..205 CDD:395101 25/116 (22%)
Mito_carr 208..297 CDD:395101 22/88 (25%)

Return to query results.
Submit another query.