DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4613 and zgc:100868

DIOPT Version :9

Sequence 1:NP_001261841.1 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_005164187.1 Gene:zgc:100868 / 554458 ZFINID:ZDB-GENE-040801-33 Length:654 Species:Danio rerio


Alignment Length:239 Identity:96/239 - (40%)
Similarity:138/239 - (57%) Gaps:6/239 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 CGVPNVN-RIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLTAAHCVHGMDMRGVSVRL- 191
            ||...:| |||||.......:||...:.|....||||:|||::::||||||.......|:.|.| 
Zfish    28 CGTAPLNSRIVGGQNAPVGAWPWQVSLQRDGSHFCGGSLINNQWILTAAHCFPNPSTTGLLVYLG 92

  Fly   192 LQLDRSSTHLGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLVDTMRPACLPSNWLQNFDFQ 256
            ||...|.....::.:|:....|..|:..:..:||.||:|...:...:.:||.||.::....|:..
Zfish    93 LQKLASFESYSMSSAVSNIIKHPNYNSDTEDNDITLLQLASTVSFSNYIRPICLAASDSTFFNGT 157

  Fly   257 KAIVAGWGLSQEGGSTSS--VLQEVVVPIITNAQCRATSYRSMIVDTMMCAGYVKTGGRDACQGD 319
            ...:.|||.:..|.|..|  .||||.|||:.|.:|......|.|.|.|:|||.:: ||:|:||||
Zfish   158 LVWITGWGNTATGVSLPSPGTLQEVQVPIVGNRKCNCLYGVSKITDNMVCAGLLQ-GGKDSCQGD 221

  Fly   320 SGGPLIVRD-RIFRLAGVVSFGYGCAKPDAPGVYTRVSRYLEWI 362
            ||||::.:. .::..:|:||||.|||:|:.||||||||:|..||
Zfish   222 SGGPMVSKQGSVWIQSGIVSFGTGCAQPNFPGVYTRVSKYQSWI 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4613NP_001261841.1 Tryp_SPc 136..362 CDD:214473 91/229 (40%)
Tryp_SPc 137..362 CDD:238113 90/228 (39%)
zgc:100868XP_005164187.1 Tryp_SPc 36..265 CDD:214473 91/229 (40%)
Tryp_SPc 37..267 CDD:238113 92/230 (40%)
Tryp_SPc 331..509 CDD:304450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I3175
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6349
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.