DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4613 and Tpsab1

DIOPT Version :9

Sequence 1:NP_001261841.1 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:341 Identity:102/341 - (29%)
Similarity:154/341 - (45%) Gaps:82/341 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 TTSSTGPPPGVQSDFIDDLIEGHKQQILSNVLGVASETPSDTASSLGSTSLSSSASPVFPLEGGG 115
            |....||.|.:.|:.....   |..::|..:|         ....|.|:.:.::.|...|.||  
  Rat    15 TPQPVGPSPALTSNRARTT---HCVRMLKLLL---------LTLPLLSSLVHAAPSLAMPREG-- 65

  Fly   116 AKAFRVNRCASCTCGVPNVNRIVGGTQVRTNKYPW-IAQIIRGTFL--FCGGTLINDRYVLTAAH 177
                                 ||||.:...||:|| ::..:..|:.  ||||:||:.::||||||
  Rat    66 ---------------------IVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIHPQWVLTAAH 109

  Fly   178 CVHGMDMRGVSVRLLQLDRSSTH-----LGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLV 237
            || |.:....:...:||.:...:     |.|::.::....::..|..    |||||:|..|:.:.
  Rat   110 CV-GPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQDGA----DIALLKLTNPVNIT 169

  Fly   238 DTMRPACLPSN----------WLQNFDFQKAIVAGWGLSQEGGSTSS--VLQEVVVPIITNAQCR 290
            ..:....||..          |          |.|||......|...  .|:||.|||:.|..|.
  Rat   170 SNVHTVSLPPASETFPSGTLCW----------VTGWGNINNDVSLPPPFPLEEVQVPIVENRLCD 224

  Fly   291 ATSYRSM--------IVDTMMCAGYVKTGGRDACQGDSGGPLIVR-DRIFRLAGVVSFGYGCAKP 346
            ...::.:        :.|.|:|||   ..|.|:|||||||||:.: :..:..|||||:|.|||:|
  Rat   225 LKYHKGLNTGDNVHIVRDDMLCAG---NEGHDSCQGDSGGPLVCKVEDTWLQAGVVSWGEGCAQP 286

  Fly   347 DAPGVYTRVSRYLEWI 362
            :.||:||||:.||:||
  Rat   287 NRPGIYTRVTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4613NP_001261841.1 Tryp_SPc 136..362 CDD:214473 86/254 (34%)
Tryp_SPc 137..362 CDD:238113 86/253 (34%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 86/253 (34%)
Tryp_SPc 66..302 CDD:238113 86/253 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346471
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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