DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4613 and tmprss2

DIOPT Version :10

Sequence 1:NP_648707.2 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:321 Identity:116/321 - (36%)
Similarity:158/321 - (49%) Gaps:51/321 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VQSD-FIDDLIE------GHK------QQILSNVLGVASETPSDTASSLGSTSLSSSASPVFPLE 112
            |.|| |.|:|.:      |:|      |.|||..|...|...|.||.||                
Zfish   191 VCSDGFNDNLAKQACAEIGYKDTYSGYQGILSPSLDFISACQSSTAVSL---------------- 239

  Fly   113 GGGAKAFRVNRCASCT-CGVPNVNRIVGGTQVRTNK--YPWIAQIIRGTFLFCGGTLINDRYVLT 174
                         .|| ||....|||||||.| |:|  :||...:.......|||::|...::||
Zfish   240 -------------KCTDCGRSTGNRIVGGTTV-TSKGVWPWQVSLHYSGRHLCGGSIITPYWILT 290

  Fly   175 AAHCVHGM-DMRGVSVRLLQLDRSSTHLGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLVD 238
            ||||||.. :..|.:|....|.:|........||.....| .::|.:..:||||:||:..:.:..
Zfish   291 AAHCVHQFSNPGGWTVYAGYLTQSEMASASGNSVNRIVIH-DFNPNTNENDIALMRLNTALTIST 354

  Fly   239 TMRPACLPSNWLQNFDFQKAIVAGWGLSQEGGSTSSVLQEVVVPIITNAQCRATS-YRSMIVDTM 302
            .:||.|||:..:.....|...|.|||....|||:|:.|||..:.:|.:..|.:.. |..:|.|||
Zfish   355 NIRPVCLPNKGMSFTAQQDCYVTGWGALFSGGSSSATLQEAKIQLIDSTICNSRPVYNGLITDTM 419

  Fly   303 MCAGYVKTGGRDACQGDSGGPLIVRDR-IFRLAGVVSFGYGCAKPDAPGVYTRVSRYLEWI 362
            :|||.: .||.|:|||||||||:...| ::.|.|..|:|.|||..:.||||..|:.:|:||
Zfish   420 ICAGKL-AGGVDSCQGDSGGPLVTNVRSLWWLLGDTSWGDGCAVRNKPGVYGNVTYFLDWI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4613NP_648707.2 Tryp_SPc 136..362 CDD:214473 90/230 (39%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597 23/85 (27%)
Tryp_SPc 252..482 CDD:238113 91/231 (39%)
Blue background indicates that the domain is not in the aligned region.

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