DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4613 and grass

DIOPT Version :10

Sequence 1:NP_648707.2 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:383 Identity:112/383 - (29%)
Similarity:167/383 - (43%) Gaps:114/383 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GVQS---DFIDDLI--EGHKQQI------------LSNVLGVASETPSDTASSLGSTSLSSSASP 107
            ||||   |:.||..  :|.:.|.            |:.......:.|:|.||.|......     
  Fly    20 GVQSARADYADDCTTPDGDQGQCMPFSSCRTIEERLTEAQKAGQKVPADYASYLQKALCG----- 79

  Fly   108 VFPLEGGGAKAFRVNRCASCT-----------------CGVPNVNRIVGGTQVRTNKYPWIA--- 152
                |..|.:.|   .|.|..                 ||.....|:..|.:|:.:..||:|   
  Fly    80 ----EFNGVRHF---CCPSANIQHNSKVMSLFKDENFDCGNFLSQRVSNGYEVKLSSRPWMALLR 137

  Fly   153 --QIIRGTFLFCGGTLINDRYVLTAAHCVHGMDMRGVSVRLLQLDRSST---------------- 199
              |.....|| |||.:|::||:|||||||||:......:||.: .|.||                
  Fly   138 YQQFGESRFL-CGGAMISERYILTAAHCVHGLQNDLYEIRLGE-HRISTEEDCRQQGRKKKCAPP 200

  Fly   200 --HLGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLVDTMRPACLP-SNWLQNFDFQKA--- 258
              ::|:.:.:    .|..||...::||||||:|::.:|....::|.||| ::.|:    :||   
  Fly   201 VVNVGIEKHL----IHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELK----EKAEQI 257

  Fly   259 ---IVAGWGLSQEGGSTSSVLQEVVVPIITNAQCRATSYRSMIVDTMMCAGYVKTGG--RDACQG 318
               .|.||| :.|.||:|.||.:..||:...:.| :.:||..:..:.:|.|    ||  :|:|:|
  Fly   258 STYFVTGWG-TTENGSSSDVLLQANVPLQPRSAC-SQAYRRAVPLSQLCVG----GGDLQDSCKG 316

  Fly   319 DSGGPL-------------IVRDRIFRLAGVVSFG-YGCAKPDAPGVYTRVSRYLEWI 362
            ||||||             :|.      .|:||.| ..|.:...||:||.|..|::||
  Fly   317 DSGGPLQAPAQYLGEYAPKMVE------FGIVSQGVVTCGQISLPGLYTNVGEYVQWI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4613NP_648707.2 Tryp_SPc 136..362 CDD:214473 88/271 (32%)
grassNP_651543.1 CLIP 32..90 CDD:197829 11/69 (16%)
Tryp_SPc 121..371 CDD:238113 89/270 (33%)

Return to query results.
Submit another query.