DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4613 and Tmprss11b

DIOPT Version :9

Sequence 1:NP_001261841.1 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001004020.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:438 Identity:113/438 - (25%)
Similarity:191/438 - (43%) Gaps:97/438 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KLNP--------PAFLLLLA----------LISICDRSWAVYNYKPPSRGYFYPKPERLPPLPVN 48
            ||.|        |.::::|.          :|.:.....||.|     :.|:|....::..:|.:
  Rat     5 KLRPVIASRKSFPPWMIILGVLGVLAILGLIIGLLVHFLAVEN-----KIYYYQGSFKVLNIPYD 64

  Fly    49 GSTTSSTGPPPGVQSDFIDDLIE-----------GHKQQILSNVLGVASETPSDTA--------- 93
            .:....|    .::|:::..::|           .:||.|.|.::.:..|..|.||         
  Rat    65 RNYERET----SLESNYLSKILEIKMVDAFESSNIYKQYINSQIITLVPENNSVTAHIWLVFKDP 125

  Fly    94 --------------------SSLGSTSLSSSASPVFPLEGGGAKAFRVNRCASCTCGVPNVNRIV 138
                                ::.||.:....:..:..:....|:....|||..........:||.
  Rat   126 WSNKENLRRRIESILHQMLENNSGSLTTDPGSLKLTEITKVDAEKIINNRCGRRPRMSATYDRIT 190

  Fly   139 GGTQVRTNKYPWIAQI-IRGTFLFCGGTLINDRYVLTAAHCVHGMDMRGVSVRLLQLDRSSTHLG 202
            ||:..:..::||.|.: :.|.. .||.:||.:|::||||||.         :|.......:...|
  Rat   191 GGSTAQKGEWPWQASLRVNGKH-HCGASLIGERFLLTAAHCF---------LRTNNPKNLTVSFG 245

  Fly   203 VTRSVAFAHAHVGYDPVSLVH----------DIALLRLDQPIPLVDTMRPACLPSNWLQNFDFQK 257
            ...:.|:...:|  :.| ::|          |:|:::|.:.:...:.:...|||.........:.
  Rat   246 TRVTPAYMQHYV--EEV-IIHEDYVKGQHHDDVAIIKLTEKVSFRNDVHRVCLPEATQVFPPGEG 307

  Fly   258 AIVAGWGLSQEGGSTSSVLQEVVVPII-TNAQCRATSYRSMIVDTMMCAGYVKTGGRDACQGDSG 321
            .:|.|||.....|.:..:||:..:.|| |||.....:|...|:|||:||||:: |..||||||||
  Rat   308 VVVTGWGSLSYNGKSPLLLQKASIKIIDTNACNSEEAYGGRIMDTMLCAGYME-GYVDACQGDSG 371

  Fly   322 GPLI---VRDRIFRLAGVVSFGYGCAKPDAPGVYTRVSRYLEWIAVNT 366
            |||:   .|| |:.|.|:||:|:.|.:.:.||||.||:.|.:|||..|
  Rat   372 GPLVHPNSRD-IWYLVGIVSWGHECGRVNKPGVYMRVTSYRDWIASKT 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4613NP_001261841.1 Tryp_SPc 136..362 CDD:214473 80/240 (33%)
Tryp_SPc 137..362 CDD:238113 79/239 (33%)
Tmprss11bNP_001004020.1 SEA 50..144 CDD:279699 14/97 (14%)
Tryp_SPc 188..414 CDD:214473 80/240 (33%)
Tryp_SPc 189..417 CDD:238113 82/242 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.