DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4613 and tmprss9

DIOPT Version :10

Sequence 1:NP_648707.2 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_002940084.3 Gene:tmprss9 / 100489279 XenbaseID:XB-GENE-993973 Length:1151 Species:Xenopus tropicalis


Alignment Length:252 Identity:90/252 - (35%)
Similarity:134/252 - (53%) Gaps:23/252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 SCTCG----VPNVNRIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLTAAHCVHGMDMRG 186
            :|.||    :...||||||:.....::||...:......|||.|:|.|:::::||||.:......
 Frog   220 NCNCGTRPAMQKTNRIVGGSDATKGEFPWQVSLRENNEHFCGATVIGDKWLVSAAHCFNDFQDPA 284

  Fly   187 VSVRLLQLDR-----SSTHLGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLVDTMRPACLP 246
            |.|..:....     |||.....|::.   .|..|||.:..:|:|:|.||.|:......:|.|||
 Frog   285 VWVAYIATTSLSGTDSSTVKATIRNII---KHPSYDPDTADYDVAVLELDSPLKFNKYTQPVCLP 346

  Fly   247 SNWLQNFDF---QKAIVAGWG-LSQEGGSTSSVLQEVVVPIITNAQCRATSYRSMIVDTMMCAGY 307
            .   ....|   :|.|:.||| |.::......|||:..|.|:..:.|.:. |.:::.:.|:||||
 Frog   347 D---PTHVFPVGKKCIITGWGYLKEDNLVKPEVLQKATVAIMDQSLCNSL-YSNVVTERMLCAGY 407

  Fly   308 VKTGGRDACQGDSGGPLIVRDRI--FRLAGVVSFGYGCAKPDAPGVYTRVSRYLEWI 362
            :: |..|:|||||||||:..:..  |.|||:||:|.|||:...||||.|||:...||
 Frog   408 LE-GKIDSCQGDSGGPLVCEEPSGKFFLAGIVSWGVGCAEARRPGVYVRVSKIRNWI 463

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG4613NP_648707.2 Tryp_SPc 136..362 CDD:214473 84/236 (36%)
tmprss9XP_002940084.3 SEA 60..149 CDD:460188