DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Pard3

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_112514.1 Gene:Pard3 / 81918 RGDID:620374 Length:1337 Species:Rattus norvegicus


Alignment Length:1118 Identity:207/1118 - (18%)
Similarity:349/1118 - (31%) Gaps:418/1118 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 PTPTKLPIEVTP----PRVPI-----------------------LEEP--KTPT----------N 397
            |..|...|||||    ..:|:                       .|||  |.||          .
  Rat   118 PYQTTSEIEVTPSVLRANMPLHVRRSSDPALTGLSTSVSDNNFSSEEPSRKNPTRWSTTAGFLKQ 182

  Fly   398 NKVDSPKTPTNELKESPISATKIPKA---KFSRAKTEGEIKLHLP-----APKQQ-----SPQSK 449
            |...||||...:..|:..|..:.|.:   :|.|......:....|     ..||:     :.:..
  Rat   183 NTTGSPKTCDRKKDENYRSLPRDPSSWSNQFQRDNARSSLSASHPMVDRWLEKQEQDEEGTEEDS 247

  Fly   450 SRI-PIVSTPTAQKTVP--------KPVSPTMNGTPLSSN---------------IPRLLQKQKS 490
            ||: |:....|..:.:|        |.|....:|.||..:               :.||.:..|:
  Rat   248 SRVEPVGHADTGLENMPNFSLDDMVKLVQVPNDGGPLGIHVVPFSARGGRTLGLLVKRLEKGGKA 312

  Fly   491 ETDLKLNLYRSKSKESSPRPPLQRANSAEAPERTF--------------------IPVL------ 529
            |.:   ||:....       .:.|.|..:...|.|                    :|..      
  Rat   313 EQE---NLFHEND-------CIVRINDGDLRNRRFEQAQHMFRQAMRARVIWFHVVPAANKEQYE 367

  Fly   530 ------LNGNSKSSNSLESVSSIGSSSSGNSVRS-PKGPK-PKPPERVQSLQKTQIPKL--QALP 584
                  :|..|....|.:|......|.:.|:.:: |:.|: .:|||::.:     .|:|  .|..
  Rat   368 QLSQREMNNYSPGRFSPDSHCVANRSVANNAPQALPRAPRLSQPPEQLDA-----HPRLPHSAHA 427

  Fly   585 TTPPQQIPKLSMQTFKQSPPTPRSTPVGTPSPTSNREIRFKIQTYE------------------- 630
            :|.|...|.|       :||...||.||:...|.....|..||..:                   
  Rat   428 STKPPTAPAL-------APPNVLSTSVGSVYNTKRVGKRLNIQLKKGTEGLGFSITSRDVTIGGS 485

  Fly   631 -----------------------------------SKTQDE-------DKLPSLFDLV------- 646
                                               .|:|:|       .|:.....|:       
  Rat   486 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA 550

  Fly   647 -HSQENDKD----------KDRDSDSLKTHNSITALL------------AAAAAEAADLSRESPP 688
             |.:|.:.:          |..|.|.:.|.:.....|            ....:...:.|:|:..
  Rat   551 FHPREMNAEPSQMQSPKETKAEDEDIVLTPDGTREFLTFEVPLNDSGSAGLGVSVKGNRSKENHA 615

  Fly   689 PL-----------VVGKCMKIVDDTNTTTCYTSSSSGEEDEDDLDASNREYICEDGEKLGPPELI 742
            .|           ...|..::..:.........|..|:.:::.::...|. :..:|.|.|..:||
  Rat   616 DLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLLGKANQEAMETLRRS-MSTEGNKRGMIQLI 679

  Fly   743 -----------NGPGPSEAYFNMFWHSNMLPTIGEVEEEFSSLE---PQSLTNG--NLVKSEESK 791
                       ..||...|           |.: .:|.|....|   ..||.:|  .|.:|....
  Rat   680 VARRISRCNELRSPGSPAA-----------PEL-PIETELDDRERRISHSLYSGIEGLDESPTRN 732

  Fly   792 KLPKMEVNAGGLAQLTDDKIADHDASATRADTRDEVTTNQTQEISSSSSSSVKSQKTTTTTRVTT 856
            ......:...|..||:......||.:....|.|..|.   ...:|..||||.........|...|
  Rat   733 AALSRIMGESGKCQLSPTVNMPHDDTVMIEDDRLPVL---PPHLSDQSSSSSHDDVGFIMTEAGT 794

  Fly   857 TKTSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIHEE---RRVLSEQKT--------- 909
            ...::.|.|:.||  :.|||               :|:.....|   |:.:||::|         
  Rat   795 WAKATISDSADCS--LSPDV---------------DPVLAFQREGFGRQSMSEKRTKQFSNASQL 842

  Fly   910 ----LSESRTRD-ALTGEEQLVTSANSKSSSAR--------FKKISSNDNLLDLGDEQDMQEQPL 961
                ..:|::.| .:..|.:|.|..:.::.|..        .||.||.::|           |..
  Rat   843 DFVKTRKSKSMDLGIADETKLNTVDDQRAGSPNRDVGPSLGLKKSSSLESL-----------QTA 896

  Fly   962 TATITQ-------------------ESSLRERLECPQDNQSIDRGTLTLSERGKQLSEKEGLTTY 1007
            .|.:|.                   ..|.|..::...|...:|             .:.||:.|.
  Rat   897 VAEVTLNGNIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPMVD-------------DDDEGMETL 948

  Fly  1008 TECETSEKESYLEGQQVLNGKGGFVSQDENSDQPTY--EREVSETLTIVNDGEKQVTKKLEQNKE 1070
            .| :|.|           :.:.|..|...:||||:|  ||::        :|:.:...|.|:.|:
  Rat   949 EE-DTEE-----------SSRSGRESVSTSSDQPSYSLERQM--------NGDPEKRDKAEKKKD 993

  Fly  1071 IAGKKGAKLLKKTDEERRLEQEAQKLIESYQKVKKEAEKLYKLELADDDQGF-DLSAFEQAEEED 1134
            .|||         |:::..|:|..||     |.||...|           |. |:..|.:..::|
  Rat   994 KAGK---------DKKKDREKEKDKL-----KAKKGMLK-----------GLGDMFRFGKHRKDD 1033

  Fly  1135 KPEVSEEIKEVKDSQPVKVD-IQIEEEVKTPNQVIGEVKVEDVNKEIKETVQVSQQEIKKEVKVS 1198
            |.|....|| ::||...:.| ::::||         :.:::...:|.:|      ::.::.....
  Rat  1034 KMEKMGRIK-IQDSFTSEEDRVRMKEE---------QERIQAKTREFRE------RQARERDYAE 1082

  Fly  1199 HQETKETFKSEEK 1211
            .|:...||..:::
  Rat  1083 IQDFHRTFGCDDE 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375 8/24 (33%)
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
Pard3NP_112514.1 DUF3534 1..146 CDD:288873 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..109
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..263 23/119 (19%)
PDZ_signaling 272..347 CDD:238492 15/84 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..441 14/55 (25%)
PDZ_signaling 465..544 CDD:238492 5/78 (6%)
PDZ_signaling 588..681 CDD:238492 12/93 (13%)
Interaction with PRKCI and PRKCZ. /evidence=ECO:0000269|PubMed:9763423 712..936 50/254 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 866..888 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 932..1015 31/129 (24%)
Interaction with FRMD4A. /evidence=ECO:0000250|UniProtKB:Q99NH2 935..1337 50/235 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1028..1055 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1110..1271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1284..1337
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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