DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Whrn

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_001008791.1 Gene:Whrn / 73750 MGIID:2682003 Length:918 Species:Mus musculus


Alignment Length:946 Identity:188/946 - (19%)
Similarity:303/946 - (32%) Gaps:323/946 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1921 IKSQVKAASGEDSTDSGLGESHRSTVNRNCQLGAGGAANNYRSILNTNQRRPLEQQLSQPPAKPP 1985
            :.:|:...|...|:...||.:..:.       |.||.|.  ..:|:.|.|: |.|.|:...::|.
Mouse     1 MNAQLDGLSVSSSSTGSLGSAAAAA-------GGGGGAG--LRLLSANVRQ-LHQALTALLSEPE 55

  Fly  1986 RTSLT-------------------------PLQPR-----SMMIPPPPPPLDQESDTDSVFSHTA 2020
            |...|                         |::.|     .::||        .||......:||
Mouse    56 REQFTHCLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIP--------RSDQLLFDQYTA 112

  Fly  2021 R-----VATP-------------PEKFALTRTLSSETNTSIASSNTSTLTSGSSAG-----SQAS 2062
            .     ..||             |.:..|.....::.:..:..|    :..||..|     |...
Mouse   113 EGLYLPATTPYRQPAWAAPDGAGPGEVRLVSLRRAKAHEGLGFS----IRGGSEHGVGIYVSLVE 173

  Fly  2063 CSSLGSTPAVDLTRRVLK------SQVINGEAV-ALSSRKSILAS-------------------- 2100
            ..||.....:.:..::|:      ::|.:.||| ||...|.::.|                    
Mouse   174 PGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWV 238

  Fly  2101 ---AKCRSAKS----------RGQEEDNDST-----------------DGEACSLANR------- 2128
               .:..|..|          |.:|:|..||                 ||.:..|..|       
Mouse   239 DPQGRSTSPPSSLPQPHGSTLRQREDDRRSTLHLLQSGDEKKVNLVLGDGRSLGLTIRGGAEYGL 303

  Fly  2129 -----RMKPISSYKLQQQQIQLGKQLV--------------VDKLINVAAYVELTSDTDDSSR-- 2172
                 .:.|.|  :.:...:::|.|::              ..||:..:.::.||  ..|..|  
Mouse   304 GIYITGVDPGS--EAESSGLKVGDQILEVNGRSFLNILHDEAVKLLKSSRHLILT--VKDVGRLP 364

  Fly  2173 ----RSDTPAKISAMFIDEE--RKASFKGDPNQQAKVKVEQVKPMVLPMLLPSAKREPLKQQTTA 2231
                ..|....|::..|.|.  ..|.|.||..::...|             |...:.|...|.|.
Mouse   365 HARTTVDQTKWIASSRIGESVANSAGFPGDHTEEGTSK-------------PGFYKGPAGSQVTL 416

  Fly  2232 ELREKFERSAAAQAQTQNHSPVIHKVTQKPHHERFSSLDSLASSSSGVSSTTQNVSTTQETATEF 2296
            .       |...|.:........|.:|::   ||.:.:..||....|..|....|....|.....
Mouse   417 S-------SLGNQTRALLDDQARHLLTEQ---ERATMMYYLAQYRGGTISVEAMVMALFELLNTH 471

  Fly  2297 GSFSSLGSNQSLITAQDVQQIVEEADPPLKTPEAFIIVLQRE--------NPESSIGITLAGGSD 2353
            ..||.|...:|:|:.||:.:...             :||:||        .|...:|.|.:..|.
Mouse   472 AKFSLLSEVRSIISPQDLDRFDH-------------LVLRREIESMKARQPPGPGVGDTYSMVSY 523

  Fly  2354 YEAKEIT-IHKILSNTPAAKDGRLKKGDRI-----LAVNGMSMRGLTH-------------RESI 2399
            .:....| .|...:...:|::..|...|.:     |...|.:.:|.|:             .|.:
Mouse   524 SDTGSSTGSHGTSTTVSSARERLLWLIDLMENTLDLEGTGETTQGSTNALPDVSVDDVKSPSEDL 588

  Fly  2400 SVLKTPRPEVVL---------------------VVTRSESLVVKALTKKRS------SLGSLSSL 2437
            ..:|.|.|...|                     :.:.:.|.:|.:..:.||      .....||.
Mouse   589 PGIKPPPPPPPLAQGHDRLLGQPRKPGREDPAPLSSAAHSGIVFSAPRNRSPPPGTAPTPGPSSA 653

  Fly  2438 NEKPTELDYERKRNYHKASRS-LDLDLDLVS-NEAG-----------ESPVATTPSTGS-VSPPQ 2488
            .:.|:...|....:.:.:||. ||..|.||: :..|           :||.|.||..|: :.||.
Mouse   654 QDSPSSPIYASISHANPSSRKPLDTHLALVNQHPIGPFPRVQSPPHLKSPPAETPGAGACLPPPS 718

  Fly  2489 PA---------------SLHDEDAEATIAGIRARRQL-------------------SRGDA--AK 2517
            |:               .:|..|:|..:..:||..|.                   |..||  .:
Mouse   719 PSEHPDAVGANQHFVLVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAGETE 783

  Fly  2518 LSTSELLERAAEARNAIAAE---IRAQAEDAAASGG----GARCVEIVKDSCGLGFSIEGGFDS- 2574
            .|||....:.|.|:|....|   ....||.|....|    .:..|.:.|.:..||.:||||.:: 
Mouse   784 ASTSGRGRQTASAKNKNGKEQPRTERTAEGANKPPGLLEPTSTLVRVRKSAATLGIAIEGGANTR 848

  Fly  2575 -PLGNRPLIVKKVFMGGAAQKTNQVRNGDEILSING 2609
             ||   |.|| .:..||:|....|::.|..||.:||
Mouse   849 QPL---PRIV-TIQRGGSAHNCGQLKVGHVILEVNG 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 22/129 (17%)
PDZ_signaling 2553..2634 CDD:238492 22/59 (37%)
WhrnNP_001008791.1 HN_L-whirlin_R1_like 38..113 CDD:259822 15/83 (18%)
PDZ_signaling 139..216 CDD:238492 16/80 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..266 4/25 (16%)
PDZ_signaling 278..358 CDD:238492 12/83 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..407 6/32 (19%)
HN_L-whirlin_R2_like 420..500 CDD:259823 20/95 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..538 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..824 53/263 (20%)
PDZ_signaling 827..898 CDD:238492 22/58 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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