DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Ush1c

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_710143.2 Gene:Ush1c / 72088 MGIID:1919338 Length:910 Species:Mus musculus


Alignment Length:889 Identity:171/889 - (19%)
Similarity:318/889 - (35%) Gaps:235/889 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   920 TGEEQLVTSANSKSSSARFKKISSNDNLLDL--GDEQDMQEQPLTATITQESSLRERLECPQDNQ 982
            |.||.:......|:.|.:.:.|    .|:.:  ..|:.::.|.:...:::...:|..|..|.:..
Mouse   146 THEEVINLIRTKKTVSIKVRHI----GLIPVKSSPEESLKWQYVDQFVSESGGVRGGLGSPGNRT 206

  Fly   983 SIDRGTL--TLSERGKQLS------EKEGL-TTYTECETSEKESYLE-GQQVLNGKG-GFVSQDE 1036
            :.::...  .:..||...|      :|.|: .::.:..:...|..|| |.|::...| .|.:.|.
Mouse   207 TKEKKVFISLVGSRGLGCSISSGPIQKPGIFVSHVKPGSLSAEVGLETGDQIVEVNGIDFTNLDH 271

  Fly  1037 NSDQPTYEREVSETLTIVNDGEKQV----TKKLEQNKEIAGKKGAKLLKKTDEERRLEQEAQKLI 1097
            .......:...|.|::||....:::    .::||:.::...::...|::|     ||..|:.|::
Mouse   272 KEAVNVLKSSRSLTISIVAGAGRELFMTDRERLEEARQRELQRQELLMQK-----RLAMESNKIL 331

  Fly  1098 ESYQKVKKEAEKLYKLELADDDQGFDLSAFEQAEEEDKPEVSEEIKEVKDSQPVKVDIQIEEEVK 1162
            :..|:::::..|....:.|::::.:         .::..::|||  |.|..:..|.|...:|::.
Mouse   332 QEQQEMERQRRKEIAQKAAEENERY---------RKEMEQISEE--EEKFKKQWKEDWGSKEQLI 385

  Fly  1163 TPNQVIGEV-------------------KVEDVNKEIKETVQVSQQEIKKEVKVSHQETKETFKS 1208
            .|..:..||                   |...:.|:.||         ||:.|   .::.:..:.
Mouse   386 LPKTITAEVHPVPLRKPKSFGWFYRYDGKFPTIRKKAKE---------KKKAK---YDSLQDLRK 438

  Fly  1209 EEKDESNELKIVKEEVKVTHQDLREQIQEIEAVKVVHKEVKVIKESAKVTTTTSHKQATK-EVII 1272
            .:|:...|.|:.||:.::..::.:.:|..: |.:|...|.:.::||.|..........|: |.|.
Mouse   439 NKKELEFEQKLYKEKEEMLEKEKQLKINRL-AQEVSETEREDLEESEKTQYWVERLCQTRLEQIS 502

  Fly  1273 SKEDHKNDSALPAVST------TKVEIISPPLEDDLGYVLHKH-----------IIFPQEKVKTA 1320
            |.|:.     :|.::|      ..|..::|||....|.: |.|           ..:|.:    .
Mouse   503 SAENE-----IPEMTTGPPPPPPSVSPLAPPLRRFAGGI-HLHTTDLDDIPLDMFYYPPK----T 557

  Fly  1321 PTPLPKPKPKPPVPTNKPKMPVNLTKPKSAPPPVPSKRSELSGSGGKPTPTQRRGSLETAQPPKP 1385
            |:.|| ..|.||......|:|        |||.:||.....|.|    :|..:|     ..||.|
Mouse   558 PSALP-VMPHPPSVNPPSKVP--------APPVLPSSGHVSSSS----SPWVQR-----TPPPIP 604

  Fly  1386 LERIIVGVEQRDEPEKPQPIINLASVDLPNVAPNSKQATVETTPVVEMP---PDELQFESHQLPD 1447
            :               |.|         |::      .|.:.||...:|   .:.|.....:..|
Mouse   605 I---------------PPP---------PSI------PTQDLTPTRPLPSALEEALGNHPFRTGD 639

  Fly  1448 DGEKEKDLHQESNDLLSGSSSSSVTT------------------------PITTPILVSATSSM- 1487
            .|....|....::   ||..|||.||                        .|:.|::|....:. 
Mouse   640 PGHPADDWEANTH---SGKPSSSPTTERSFPPAPKTFCPSPQPPRGPGVSTISKPVMVHQEHNFV 701

  Fly  1488 --DSVQSVI---EVVNGMPIISNQQTDDDDIDEVAAYDDG------MHLEAEGTKDVRPVQEVTT 1541
              .:|:|.:   |::..|.:.......|     ...|::|      ...|....||||      .
Mouse   702 YRPAVKSEVLPQEMLKRMVVYQTAFRQD-----FRKYEEGFDPYSMFSPEQIAGKDVR------L 755

  Fly  1542 LTLDREHESDLGTLSNHHSNISSISGINASSNIPAATLISSSIKKTSTEAATTKPAAPQIPGKME 1606
            |.:.:|...||              .:....:.|...::.|::    .|....:.....:.|. |
Mouse   756 LRIKKEGSLDL--------------ALEGGVDSPVGKVVVSAV----YEGGAAERHGGVVKGD-E 801

  Fly  1607 LLSSNTGTTT--TTTTATHHLHQATTTKQLLVQDYLSYASPPTY----SRLPPDGHEFPP----- 1660
            :::.|....|  |...|...|.:|.......:...::...|..|    |.||....|.|.     
Mouse   802 IMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPPKEYDDELSSLPSSAAESPQLARKQ 866

  Fly  1661 -NFSEPLIMHSH--PLKVTTELSYEIQKGGKDES----SAPPLP 1697
             ...||:..|..  .|:.|..|....::...|.|    |:.|.|
Mouse   867 LEAYEPVCRHGFFLQLEPTNLLLKSRERNQTDPSWRPASSAPSP 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375 5/24 (21%)
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
Ush1cNP_710143.2 N-terminal domain. /evidence=ECO:0000250|UniProtKB:Q9Y6N9 1..86
harmonin_N 2..80 CDD:259819
PDZ_signaling 85..165 CDD:238492 5/18 (28%)
Mediates interaction with MYO7B. /evidence=ECO:0000250|UniProtKB:Q9Y6N9 194..833 144/758 (19%)
PDZ_signaling 209..289 CDD:238492 15/79 (19%)
Cgr1 <309..>358 CDD:281823 9/62 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..688 35/174 (20%)
PDZ_signaling 751..838 CDD:238492 19/111 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..910 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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