DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbg and grip2a

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:XP_017212845.1 Gene:grip2a / 568084 ZFINID:ZDB-GENE-081104-132 Length:1100 Species:Danio rerio


Alignment Length:1174 Identity:219/1174 - (18%)
Similarity:398/1174 - (33%) Gaps:369/1174 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1595 KPAAPQIPGKMELLSSNTGTTTTTTTATHHLHQATTTKQLLVQDYLSYASPPTYSRLPPDGHEFP 1659
            |...|...|..:..|.::|.|...:.|..  .:..||.:|:.::..|                  
Zfish    55 KDDVPYTKGSKDTASDSSGFTNRCSLADE--QRGVTTVELIKKEGSS------------------ 99

  Fly  1660 PNFSEPLIMHSHPLKVTTELSYEIQKGGKDESSAPPLPKTGPPATVPRKVYRQDLVINVEPAPSL 1724
                         |.:|.       .||.|:...|.:....|.....|...     :||      
Zfish   100 -------------LGLTI-------SGGCDKEGKPRVSNLRPGGLAARSDQ-----LNV------ 133

  Fly  1725 TRDYQRSLSGGTPRKPSDWRKDE--KSEKSVRDKIAMFSSNNELD-AIPPAPATAPISSSFTRKP 1786
             .||.:|::|   ...|..|.||  ...|::.:::.:     |:: .:||...:.|.|      .
Zfish   134 -GDYIKSVNG---INLSKLRHDEIISMLKNIGERVVL-----EVEYELPPFAPSNPCS------V 183

  Fly  1787 LNRSSENLLDSCSSSSAPSLKTRAMSVENLNDVQRQYQLAKQLPQLHV-----ADSMYSLNTATP 1846
            ::::.|..|:...:|....|:         ......:..|:.|...:|     ||          
Zfish   184 ISKTIEVCLEKEGNSFGFVLR---------GGFHEDWHKARPLVVTYVRPGGPAD---------- 229

  Fly  1847 TPSYASLPRRSHGGSYSSGVERRISFSGEGGDAANRKAAITNILEQRRRSLSKLRGLVIPERPQL 1911
                       ..|:..:| :|.:|.:|...:......|:|.|::..:.:..            |
Zfish   230 -----------REGTLRAG-DRVLSVNGVAVNRQKHADALTLIMQSSQEAFF------------L 270

  Fly  1912 LEPILDLPEIKSQVKAASGEDSTD------SGLGESHRSTVNRNCQ------------------L 1952
            :|  .|: .:...|:.:||....|      |.||.|..:::.||.|                  |
Zfish   271 IE--YDI-MVMDSVQKSSGPLQVDIARSAGSVLGLSLSTSLYRNKQVITIQKIKPASVADRCGAL 332

  Fly  1953 GAG-------GAANNYRSILNTNQRRPLEQQLSQPPAKPPRTSLTPLQPRSMMIPPPPPPLDQES 2010
            .||       |.:..:.|::...|......:|         |.|..|           |.|....
Zfish   333 HAGDILLAIDGMSTEHCSLMEAQQLLSSSSEL---------TKLEIL-----------PSLHSSQ 377

  Fly  2011 DTDSVFSHTARVATPPEKF-----ALTRTLSSETNTSIASSNTSTLTSGSSAGSQA----SCSSL 2066
            ||..|.....|.....|.:     |..:|.|:.:.|:...|:.| ::||.||.:..    :|.|.
Zfish   378 DTVRVQRSCQRQWDSSENYTNALPAFQKTPSAWSQTTPTPSHRS-VSSGVSANTSGFHSYNCGSQ 441

  Fly  2067 GSTPAVDLTRRVLKSQVINGEAVALSSRKSILASAKCRSAKSRGQEEDNDST----------DGE 2121
            .:.|                .....|:..|..:|.:|.:.|.|.:.:::.|:          .|:
Zfish   442 SAYP----------------NTYPSSTLPSYPSSPRCSATKRRHRRKEHKSSLSLASSTVGAGGQ 490

  Fly  2122 ACSLANR----RMKPISSYKLQQQQIQLGKQLVVDKLINVAA--YVELTSDTDDSSRRSDTPAKI 2180
            ...|.:.    |..|::.:.||.|    |.....:.|...||  ::|           .||||:.
Zfish   491 VVHLESAEVLLRGDPLTGFGLQLQ----GGVFATEPLSAPAAIRFIE-----------PDTPAER 540

  Fly  2181 SAMFIDEERKASFKGDPNQQA----------------KVKVEQVKPMVLPMLLPSA--------K 2221
            ..:....:|..|..|.|.:..                |:.:| |:..|...::||:        |
Zfish   541 CGVLQVGDRILSINGIPTEDGTLEEANQLLRDAALANKIALE-VEFDVAESVIPSSGTFQVKLPK 604

  Fly  2222 REPLKQQTTAELREKFERSAAAQAQTQNHSPVIHKVTQKPHHERFSSLDSLASSSSGVSSTTQNV 2286
            |..::...|....:|..:.... ::.|..| :.|::......:|..::|::              
Zfish   605 RRGVELGITISASKKAGKPLII-SEIQKGS-IAHRIGTLEPGDRLLAIDNV-------------- 653

  Fly  2287 STTQETATEFGSFSSLGSNQSLITAQDVQQIV-------EEADPPLKTPEAFIIVLQRENPESSI 2344
                       ...:.|..::::..|..:.:|       |:....|::..:.|..::.:.....:
Zfish   654 -----------RLDNCGMEEAMMVLQQAEGMVKLRIQKDEDNLDELESSGSVIFTVELKRHGGPL 707

  Fly  2345 GITLAGGSDYEAKEITIHKILSNTPAAKDGRLKKGDRILAVNGMSMRGLTHRESISVLKTPRPEV 2409
            |||:: |::.....|.|..:..|..|.:.|.|..|||:||:|.||::|....|:|.:|:|....|
Zfish   708 GITIS-GTEEPFNPILISSLTRNGLAHRTGALHIGDRVLAINNMSLKGKPLSEAIHLLQTAGDTV 771

  Fly  2410 VL-VVTRSESLVVKALTKKRSSLGSLSSLNEKPTELDYERKRNYHKASRSLDLDLDLVSNEAGES 2473
            .| :..||:.|:       .|..||.|......::::.:|..::.:...|     ||:..     
Zfish   772 TLKIKKRSDPLL-------DSERGSPSRTASCVSDMEDDRSDSFRRGKYS-----DLLRQ----- 819

  Fly  2474 PVATTPSTGSVSPPQPASLHDEDAEATIAGIRAR-----------------RQLSRGDAAKLSTS 2521
               |||      |...:::...|:.|..||..::                 ||.:.       .|
Zfish   820 ---TTP------PSLDSAMDSWDSSALDAGYGSQGVYIHRPSDFTLHPSDWRQTNH-------RS 868

  Fly  2522 ELLERAAEARNAIAAEIRAQAEDAAASGGGARCVEIVKDSCGLGFSI-----EGGFDSPL----- 2576
            .|:.|....|..: .:.|...||...||.       |..:||..::.     |..:...|     
Zfish   869 PLMSRRPAHRPTV-YDGRLSEEDWTYSGS-------VSPACGHNYNSTTDAQENYWSQALQDLET 925

  Fly  2577 -GNRPLI--VKKVFMGGAA-------QKTNQVRNGDEILSINGASTSRMTRVDAWNYMKQLPLGP 2631
             |...::  ::...|.|:.       :|.|:.:.  :.|.::..:||..|..|.......:||..
Zfish   926 CGQSEILRELEATIMSGSTLSLGEDFEKQNESKT--KFLELSPENTSVNTPEDLKENSPSVPLEL 988

  Fly  2632 VKIC 2635
            .|||
Zfish   989 HKIC 992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 26/82 (32%)
PDZ_signaling 2553..2634 CDD:238492 17/100 (17%)
grip2aXP_017212845.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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