DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbg and PsGEF

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster


Alignment Length:2976 Identity:524/2976 - (17%)
Similarity:914/2976 - (30%) Gaps:1050/2976 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 ELRSPETTP----TPKPRVQLATVEPKKRSIIPMPRKIPTPTKLPIEVTPPRVPILEEP-KTPTN 397
            |:|..:|.|    |....:.....|..:.|:..|  ::.|||.|..:    ||...:.| ||.|.
  Fly   131 EVRCTKTLPGAGATTSTTILADNAEWSETSVHEM--EVRTPTHLKRQ----RVVRRKNPHKTTTI 189

  Fly   398 NKVDSPKTPTNELKESPISATKIPKAKFSRAKTEGEIKLHLPAPKQQSPQSKSRIPIVSTPTAQK 462
            |:..|.:..    |..|:..  :|..|...:.:.......|...:||..:..|.....:||.:..
  Fly   190 NQTQSHQAK----KLEPLQL--VPSTKRCLSFSSSSASSDLDEDEQQVAKRSSLASPTTTPPSHC 248

  Fly   463 TVPKPVSPTMNGTPLSSNIPRLLQKQKSETDL---------KLNLYRSKSKESSPRPPLQRAN-S 517
            |.   .:.:::.:..|:....:...|:...|:         :||::..:.::      |||:: |
  Fly   249 TT---TTSSISSSSSSNGGADMEASQRGSIDVSIAFDAKEQQLNVHVIRCRD------LQRSHGS 304

  Fly   518 AEAPERTFIPVLLNGNSK--------SSNSLES-----------------------VSSIGSSSS 551
            .......::.|.|:|.::        |..|:.|                       :|| |..::
  Fly   305 GNGSINAYVKVALSGGAQPPGYGGHSSGGSMSSGYQRTAVHRHSGRPYFDQRFNFQISS-GEETA 368

  Fly   552 G--------------NSV---------RSPKGPKPKPPERVQSLQ-------KTQIPKLQALPTT 586
            |              |||         |...|.:.:..||:..|:       :::.......|..
  Fly   369 GQYLQLAVWHRDRHLNSVPVTQSEWQARVKSGTERRTAERLAKLENAGNEAKRSEFLGCSTFPLN 433

  Fly   587 ----PPQQIPKLSMQTFKQS--PPTPRSTPVGTPSPTSNREIRFKIQTYESKTQDEDKLPSLFDL 645
                |...:...|.:...|:  |||.|.:     .|.:|.....|.:|..:|.||:.:..|..::
  Fly   434 ELVHPDSGVSAGSYKLHAQACPPPTSRHS-----QPKANAGQDQKQETEAAKDQDKQQDDSPAEM 493

  Fly   646 VHSQENDKDKDRDSDSLKTHNS---------ITALLAAAAAEAADLSRESPPPLVVGK------- 694
            ..:......|...:.|....||         |:..:.:...|...|.::...|:.:.|       
  Fly   494 AAAVTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKEDPLLPQQPQQPMKLSKKALHQRD 558

  Fly   695 -----CMKIVD-------DTNTTTCYTSSSSGEEDEDDLDASNREYICEDGEKLGPPE--LINGP 745
                 .::.::       :.|:||....::..:......:.||..:: .:|...|..:  :.|..
  Fly   559 ADENLFLRFLELDPPADGNANSTTTQAQATGSQSSASKANESNANHL-NNGTSGGRRQSTMPNSG 622

  Fly   746 GPSEA--------------------------YFNMFW-HSNMLPTIGEVEEEFSS---------- 773
            |.|..                          .|::.| |.   |.:.::|...|:          
  Fly   623 GSSVGGAVRQQQGRTPFTMTKRLTRTEERGFGFSIVWTHP---PRVEKIEAGLSADRCGILPGDY 684

  Fly   774 ---LEPQSLTNG------NLVKSE-ESKKLPKMEVNAGGLAQLTDDKIADHDAS-ATRADTRDEV 827
               ::..::...      ||::|: .|..|.....:..|...:|...:..::.. :||......:
  Fly   685 VIFVDKHNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLGQNNVHISTRLGAAVGL 749

  Fly   828 TTNQ-TQEISSSSSSSVKSQKTTTTTRVTTTKTSSSSSSSSCSSTV-----------IPDVAFK- 879
            .:.: |...:::.:::|.|.:.||:||:.....|.|..:::||.|.           :|.|.|. 
  Fly   750 GSEEHTLATTATGTTTVMSLQRTTSTRIQPLANSMSRPATACSGTTSSIEAAKRRLHLPQVTFSK 814

  Fly   880 -----------------------------------LQPYEERDDILS-----------EPITTIH 898
                                               :||..||.|::|           :.:..|.
  Fly   815 ESIVPVTDNRRRFLLQLISREQNFTAALHFGVDRFVQPLGERKDLISPNDHRTLFQNIDELLRIA 879

  Fly   899 EERRVLSEQKTLSESRTRDALTGEEQLVTSANSKSSSARFKKISSNDNLLD--LGDEQDMQEQPL 961
            |:   :.||...|:.:.::........|..:.:.:..|.:||..:.....|  |.::........
  Fly   880 ED---ILEQLCSSDQQDQEPQMNFASRVYLSKTTAICAAYKKYCNGIKRADCVLVNKSRQTGSEF 941

  Fly   962 TATITQESSLRERLE-------------------------CPQDNQ------------------- 982
            .|.||:.:..|:|.:                         |..|.:                   
  Fly   942 IAFITEPAVPRKRPDLTMFIHRPLQHFREILKLMQLLAGNCHVDTEEHKNFSTVINELQAAYREI 1006

  Fly   983 SIDRGTLTLSERGK---QLSEKEGLTTYTECETSEKESYLEGQQVLNGKGGFVSQDE-NSDQPTY 1043
            ::..|.:.....|:   .|.:.|....:|:|:.....  ::|:|.:  .||.:|:.| .|.:|.:
  Fly  1007 TVSSGLMEPLGEGRPLLTLQDLESRMVFTKCKPFTLA--VQGRQWI--FGGDLSRVEGRSVKPYW 1067

  Fly  1044 EREVSETLTIVNDGEKQVTKKLEQNKEIAGKKGA--KLLKKTDEERRLEQEAQKLIES------- 1099
            ....|:.:........:|....|:...||....:  .:.|||.|.|.......:|.||       
  Fly  1068 TLLFSDIIVFAKVSRDRVLFITEEPIPIANVVDSCFHMRKKTTEFRLTVDPNGRLAESPTGYCAP 1132

  Fly  1100 -YQKVKKEAEKLYKLELADDDQGFDLSAFEQ-------------------AEEEDKPEVSEEIKE 1144
             ..:..|...:...|.|.  ....:|.|..|                   :...|.|:|...:..
  Fly  1133 DLTRTPKRGARRKSLILR--APSLELKAVWQNLLQRQIFLVNAALGSTPLSSPLDSPDVLNTLVP 1195

  Fly  1145 VKD-----------SQPVKVDIQIEEEVK--TPNQVIGEV------------------------- 1171
            :.|           ..|....|.::::.|  ..|...|.|                         
  Fly  1196 LSDIGLTTASMGSMKLPSLDSIHLKQQQKQQRTNNSHGHVHSATGVATDRTADRSHGHNHGIHGG 1260

  Fly  1172 KVEDVNKEIKETVQV------------------------SQQE------IKKEVKVSHQETKETF 1206
            .||.:...|.|..::                        .||:      .:.:..||.::.:..|
  Fly  1261 HVEQIELLIDEKCRILNKTGTPKSSALHLANWMKGQLDKQQQQARLAAIARSQENVSAEDEQLIF 1325

  Fly  1207 KSE-EKDESNELKIVKEEVKVTH---QDLREQIQEIEAVK----------VVHKEVKVIKESAKV 1257
            .|: |:||           ::|:   |.|.::.:|:...|          ...|.:..::|.:..
  Fly  1326 NSDSEQDE-----------RITYWTRQQLEKRTKELNLAKENGGLSARPNFGGKRLSGVEELSMS 1379

  Fly  1258 TT----TTSHKQATKEVIISKEDHKNDSALPAVSTTKVEIISPPLEDDLGYVLHKHIIFPQEKVK 1318
            .|    :||..:....||.......:||.:...|       ||.:.|.|....|.|....|    
  Fly  1380 ATSDIYSTSEAEGVTSVISQSHSTTSDSQITVRS-------SPIVLDKLAVCRHCHKNCQQ---- 1433

  Fly  1319 TAPTPLPKPKPKPPVPTNKPKMPVNLTKPKSAPPPVPSKRSELSGSGG----KPTPTQRRGSLET 1379
                                      :.|..|.|         .|.||    ..||.....||:.
  Fly  1434 --------------------------SGPGGARP---------GGGGGVNNSSSTPVLLCNSLKV 1463

  Fly  1380 ----AQPPK--PLERIIVGVEQRDEPEKPQ-------PIINLASVDLPN------VAPNSKQATV 1425
                :.|.:  .|...|.|..:...|:...       .:.:::|..:..      ||.:|::.|.
  Fly  1464 QHSQSSPNRCCKLSNGIAGATEMANPKNSNRTGTGTGSVTSMSSSTITGELSSKVVASSSRRETG 1528

  Fly  1426 ET-TPVVEMPPDELQFESHQLPDD--GEKEKDLHQ--ESNDLLSGS---------SSSSVTT--- 1473
            :| :.|.::..||:.....:..||  |........  |.|.:::||         |.||:..   
  Fly  1529 DTESDVAQLITDEISQSQSEATDDSVGAMPNSSRSAGEGNPVITGSRLRHLDPPVSVSSLPNGHC 1593

  Fly  1474 ----------PITTPILVSATSSM----------DSVQSVIEVVNGMPIISNQQTDDDDIDEV-- 1516
                      |:..|......:.|          ..|::::.:.....|:.:..|........  
  Fly  1594 SAGVGGGSPKPLPPPRRTRVVAQMCQEPPRPKANQQVKAIVTITETARIMRSSPTKGSGSGSATG 1658

  Fly  1517 --------AAY---------DDGMHLEAEGTKDVR--------PVQEVTTLTLDREHESDLGTLS 1556
                    |.|         :|..|.:....|...        |.|..|||...:|.|.      
  Fly  1659 TGSVGGSPAKYAACHCRCTPEDFTHAQLSPDKMEHQTCKLLESPKQTTTTLEQKQEDEQ------ 1717

  Fly  1557 NHHSNISSISGINASSNIPAATLISSSIKKTSTEAATTKPAAPQIPGKM-----------ELLSS 1610
                  .|:..|..:...|||||...........:..|....|..|..:           ...||
  Fly  1718 ------LSLMLIGLAQLAPAATLCGQERIPKEENSTPTIAVVPPTPDSVLTKTSTHVWDNSGCSS 1776

  Fly  1611 NTGTTTTTTTATHHLHQATTTKQLLVQDYLSYASPPTYSRLPPDGHEFPPNFSEPLIMHSHPLKV 1675
            |.|.|:||:|||      |||||                                      |.:.
  Fly  1777 NGGGTSTTSTAT------TTTKQ--------------------------------------PRQA 1797

  Fly  1676 TTELSYEIQKGGKDESSAPPLPKTGPPATVPRKVYRQDLVINVEPAPSLTRDYQRSLSGGT---- 1736
            ..|   .|.:...|||   ||.:..|        ||        |..|..|.:      ||    
  Fly  1798 IIE---NIPEDSCDES---PLDEEPP--------YR--------PMSSALRRF------GTMSSL 1834

  Fly  1737 PRKPSDWRKDEKSEKSVRDKIAMFSSN--------NELDAIPPAPATAPISSSFTRKPLNRSS-- 1791
            .:.|||.|.||..|  :.|.:..|..|        ||.|     ...|....:..:..|..||  
  Fly  1835 EKLPSDDRMDEADE--LDDDLDSFKPNGHDGNSPQNEED-----DEDADSERALVQNDLGASSSS 1892

  Fly  1792 ------ENLLDSCSSSSAPSLKTRAMSV--------------ENLNDVQRQYQLAKQLPQLHVAD 1836
                  |.|.....::.|.:..:..||.              .|..|.|:|:|...........|
  Fly  1893 GVIVNGEGLASGAWTNRAGAYVSDKMSFFEESRAFIDKYLGRWNAGDAQQQHQQGTASETDEQMD 1957

  Fly  1837 SMYSLNTA------TPTPSYASLPRRSHGG--------------SYSSGVERRISFSGEGGDAAN 1881
            ...|..|:      |||          .||              ::||..:...|.:    |..:
  Fly  1958 ECTSGATSGEEVWGTPT----------SGGDNDDQDLQLINSENTHSSPTKSSTSLN----DDDD 2008

  Fly  1882 RKAAITNILEQRRRSLSKLRGLVIPERPQLLEPILDLPEIKSQVKAASGEDSTDSGLGESHRSTV 1946
            .:..:..:|.....:.|.:|||:.....:.|||:.: .|.:|. :..:.:||.|...||   :|.
  Fly  2009 TELMMDELLMAPPMTASTIRGLLPRFYRRRLEPLFE-EETESD-EEKTQQDSDDIKKGE---ATT 2068

  Fly  1947 NRNCQLGAGGAANNYRSILNTNQRRPLEQQLSQPPAKP--------------------------- 1984
            |.:....:.|::::..|:               |||.|                           
  Fly  2069 NGHYLEDSAGSSSDSESV---------------PPAPPLVPRPVVPDREEDPSAEGQQENLAMED 2118

  Fly  1985 ------------PRTSLTPLQPRSMM---------IPPPPPP----------LDQESDT------ 2012
                        |..:.:.:.||.::         |.|.||.          |||...:      
  Fly  2119 QEDLHSSVERLLPNLATSAMGPRPLLTTRLLPTTAIDPQPPAVLVASSCEYLLDQRPSSVPGRDL 2183

  Fly  2013 --DSVFSHTARVATP----PEKFALT-----RTLSSETNTS-------IASSNTSTLTSGS---S 2056
              .|:.:.|...:.|    |.|.|.|     .|::::|.|:       ..||..||::|.|   |
  Fly  2184 AGGSIGTTTMTSSRPTPLSPAKAAATPIGMNATMTTKTTTTTMMTPSRAPSSTISTISSASDTTS 2248

  Fly  2057 AGSQASCSSLGSTPAVDLTRRVLKSQ--VINGEA------------------------------V 2089
            :|.:||.......|.....||:|.:|  :|.|:|                              .
  Fly  2249 SGGRASGRPPRFVPPPPPPRRLLLTQTDLIAGQAKTELPRKKSGATADSGCSVAVGDAASASDPT 2313

  Fly  2090 ALSSR-------KSILASAKCRSAKSRGQEEDNDSTDGEACSL-------------ANRRMKPIS 2134
            |:.||       .|.||||......|        ||..|.|.|             |:|..|||.
  Fly  2314 AIGSRTMPSTPSTSSLASAVAPKRPS--------STIIETCLLGAPRPASATSSATASRMAKPIR 2370

  Fly  2135 SYKLQQQQIQLGKQLVVDKLINVAAYVELTSDTDDS------------SRRSDTPAKISAMFIDE 2187
            .....|.|.|...|..      .||....::...|:            |.|.:....::...:.:
  Fly  2371 QSPPTQHQSQPRGQSC------PAAVPAPSTAAPDAPTVPMPHAGCGLSPRLEMRLALNHDILGD 2429

  Fly  2188 ERKASFKGDPNQQAKVKVEQVKPMVLPMLLPSAKREPLKQQTTAELREKFERSAAAQAQTQNHSP 2252
            |....::..|:      :..:....|........|:.|.:..|..::.|  .:..:.:|.:|...
  Fly  2430 EDLICYEPGPD------LTTILGHDLSTFHRLTGRDLLSRSATNRVQPK--EAVISYSQQRNSKM 2486

  Fly  2253 VIHKVTQKPHHERFSSLDSLASSSSGVSSTTQNVSTTQETATEFGSFSSLGSNQSLITAQDVQQI 2317
            ....|.::|.        .|::.:.|.|::..|.:.::.:::...|....|..::.:.....||:
  Fly  2487 DTPTVNRRPR--------PLSAGALGGSTSNSNPNNSRSSSSHGNSPLGGGLTRAGVEPVGQQQL 2543

  Fly  2318 VEEADPPLKTPEAFIIVLQRENPESSIGITLAGGSDYEAKEITIHKILSNTPAAKDGR--LKKGD 2380
            |.:|.                  ..|.| .:.|||....         .|:.|....|  .|.||
  Fly  2544 VVQAG------------------GGSAG-RVGGGSGSAG---------GNSTACSSNRGGSKLGD 2580

  Fly  2381 RILAVNGMSMRGLTHRESISVLKTPRPEVVLVVTRSESLVVKALTKKRSSLGSLSSLNEKPTELD 2445
                     :..|..||.|..:...|....:..|.|.:.::...|:.||.:.|....:..|....
  Fly  2581 ---------LEILARREKIYSMSQSRSGCRVRETTSTTTLMAMATEMRSGMDSEKRDSSWPKRAA 2636

  Fly  2446 YERKRNYHKASRSLDLDLDLVSNEAGESPVATTPSTGSVSPPQPASLHDE--------------D 2496
            ........::|.|:|          |...::||.:| :.:..:.|.|..|              :
  Fly  2637 AAASLTRTRSSTSMD----------GAGAISTTTTT-TTTMTEEAFLETEVGRSKRLINFIKRRN 2690

  Fly  2497 AEATIAGIRARRQLSRG------DAAKLSTSELLERAAEARNAIAAEIRAQAEDAAASGGGARCV 2555
            :|.|.:...:....|.|      ..:...:|.||::....        ::||:|:         |
  Fly  2691 SEITASSTSSTPNFSDGAIGEQPQPSHSQSSLLLQKLPPG--------QSQAQDS---------V 2738

  Fly  2556 EIV-----KDSCGLGFSIEGGFDSPLGNRPL---IVKKVFMGGAAQKTNQV 2598
            |:.     ||:           |.|..||.|   |.|:       ::||.|
  Fly  2739 EMAQMSPRKDN-----------DKPSLNRRLWKQITKR-------RRTNSV 2771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375 6/32 (19%)
PDZ_signaling 2331..2413 CDD:238492 16/83 (19%)
PDZ_signaling 2553..2634 CDD:238492 14/54 (26%)
PsGEFNP_996333.4 DUF4799 <102..209 CDD:292674 23/89 (26%)
C2 286..>381 CDD:278593 16/101 (16%)
PDZ_signaling 644..716 CDD:238492 11/74 (15%)
RhoGEF 831..1000 CDD:295373 24/171 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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