DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Pdzd11

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:XP_038955522.1 Gene:Pdzd11 / 302422 RGDID:1560007 Length:145 Species:Rattus norvegicus


Alignment Length:112 Identity:28/112 - (25%)
Similarity:53/112 - (47%) Gaps:32/112 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2323 PPLKTPEAFI---------------------IVLQRENPESSIGITLAGGSDYEAKE--ITIHKI 2364
            |..:.|.|:|                     ||..::.|.:.:|..:.||   :|.:  |.|.|:
  Rat    16 PAYENPPAWIPPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNIRGG---KASQLGIFISKV 77

  Fly  2365 LSNTPAAKDGRLKKGDRILAVNGMSMRGLTHR-----ESISVLKTPR 2406
            :.::.|.:.| |::||::||||.:..:.:.|.     :::.:|||.|
  Rat    78 IPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKLCVFQAVEILKTAR 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 25/104 (24%)
PDZ_signaling 2553..2634 CDD:238492
Pdzd11XP_038955522.1 PDZ_signaling 45..130 CDD:238492 24/83 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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