DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Pdzd7

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_001099832.2 Gene:Pdzd7 / 293996 RGDID:1309882 Length:1031 Species:Rattus norvegicus


Alignment Length:974 Identity:181/974 - (18%)
Similarity:292/974 - (29%) Gaps:351/974 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1937 GLGE---SHRSTVNRNCQLGAGGAANNYRSILNTNQRRPLEQQLSQPPAKPPRTSLTPLQPRSMM 1998
            ||||   :..|:::....||:..|:...|.:|...||      |...|::..|.| :|: .|.::
  Rat    13 GLGELSSASLSSLSSRGHLGSDSASTATRYLLRKQQR------LLNGPSRGIRAS-SPM-GRVIL 69

  Fly  1999 IPPPPPPLDQESDTDSVFSHTARVATPPEKFALTRTLSSETNTSIASSNTSTLTSGSSAG----- 2058
            |   ..|::..||...:........:|..:...:....||....|..|.....:|...||     
  Rat    70 I---NSPIEANSDESDIIHAVCVEKSPSGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGD 131

  Fly  2059 --SQASCSSLGSTPAVDLTRRVLKSQVIN------GE--AVALSSRKSI--------LASAKCRS 2105
              ::.:..||.||......|.:..|..::      |.  .:..|..|:.        |...||.|
  Rat   132 KITEVNGLSLESTTMGSAVRLLTSSSRLHMMVRRMGRVPGIKFSKEKTTWVDVVNRRLVVEKCSS 196

  Fly  2106 AKSRGQEEDN-------DSTDGEACSLANRR----------MKPISSYKLQQQQ-IQLGKQ---- 2148
            ..|....||.       .:|..:.|...|.|          :..:....|.::. |::|.|    
  Rat   197 TPSDSSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSKVDHGGLAEENGIKVGDQVLAA 261

  Fly  2149 ------------------------LVVDKLINVAAYVELTSD----------------------T 2167
                                    |.:.:.....||.|:.|:                      :
  Rat   262 NGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEMVSEYCWLDRLSNGVLQQLSPASESSS 326

  Fly  2168 DDSSRRSDTPAKISAMFIDEERKASFKGDPNQQAK-----------------VKVE---QVKPMV 2212
            ..||..|..|....::..|.........||..|..                 .:||   .|:|.|
  Rat   327 SVSSYASSAPCSSGSLPSDRMDVCLGPEDPTSQGPGWGRADTAMQTEPDMGGSRVETWCSVRPTV 391

  Fly  2213 LPMLL---------PSAKR---EPLKQQTTAELREKFERSAAAQAQTQNHSPVIHKVTQKPHHER 2265
               :|         ||:.|   ..|.:.....|.....|......::|:|..:..:..|:...: 
  Rat   392 ---ILRDTAIRSDGPSSTRHLDSALSESPKTALLLALSRPRPPITRSQSHLTLWEEKKQRKKEK- 452

  Fly  2266 FSSLDSLASSSSGVSSTTQNVSTTQETATEFG-------------------------------SF 2299
                    |.|||.....|...|......:.|                               ..
  Rat   453 --------SGSSGEKGALQRSKTLMNLFFKGGRQGRPAGDGHREAWTLDSRSPTKVRPRLDLEKA 509

  Fly  2300 SSLGSNQSLITAQDVQQIVEEADPPLKTPEAFIIVLQRENPESSIGITLAGGS----------DY 2354
            .|:|..|..:|.:                      |:|:.......::...||          ..
  Rat   510 GSVGPVQKFVTWR----------------------LRRDRERGRALLSARSGSPSGQGPNVDEQM 552

  Fly  2355 EAKEITIHKILSNTPAAKD--GRLKKGDRILAVNGMSMRGLTHRESISVLKTP------RPEVVL 2411
            :|.|       |..|..:|  .||...|.:|||.....| ..|...:..|..|      ||..:|
  Rat   553 QAWE-------SRRPLIQDLARRLLTDDEVLAVTRHCSR-YVHEGGVEDLVRPLLAILDRPAKLL 609

  Fly  2412 VVT------------RSESLV----VKALTKKRSSLGSLSSLNEKPTELDYERKRN--------- 2451
            ::.            |.:|:|    ::|....:|.....|:|  :||..|...||:         
  Rat   610 LLRDIRSVVAPTDLGRFDSMVMPVEMEAFEALKSRAVGPSAL--RPTRQDTPPKRHLITPVPDSR 672

  Fly  2452 -----------------------------------YHKASRSL-DLDLDLVSNEAGESPVATTPS 2480
                                               :||....| |:.:|..|...|.......|.
  Rat   673 GGFYLLPVNSCSEDEDGEIRERLGGLKVSLGASAPHHKGIPPLQDVPVDAFSLRRGACAPPPQPP 737

  Fly  2481 TGSVSPPQPASL-----HDEDAE------------------ATIAGIRAR-RQLSRGDAA----- 2516
            ..:..||:|..|     ..||.:                  .:.:|.|:| |...||.:|     
  Rat   738 PVAPRPPRPNWLLTEPPSREDTQQNQNQTPGQSCSRSRSHSRSRSGSRSRSRSQGRGKSAGCRRS 802

  Fly  2517 --------KLSTSELLERAAEARNAIAAEIRAQ------------------AEDAA--ASGGGAR 2553
                    ..|.:....|..:||..:...:..|                  |||.|  |:.|..|
  Rat   803 PSPAPITTATSANGRYHRPRKARPLLPRPLDGQVAKVGVRQEPLENGIDQTAEDEAGNATTGELR 867

  Fly  2554 CVEIVKDSCGLGFSIEGGFDSPLGNRPLI-VKKVFMGGAAQKTNQVRNGDEILSINGASTSRMT 2616
            .|.:.|....||.||.||.:|.:  :|:: ::|:|.||||.....::.|.|:::::|.|..::|
  Rat   868 TVTLSKMKQSLGISISGGIESKV--QPMVKIEKIFPGGAAFLCRALQAGFELVAVDGESLEQVT 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 22/99 (22%)
PDZ_signaling 2553..2634 CDD:238492 22/65 (34%)
Pdzd7NP_001099832.2 PDZ_signaling 84..164 CDD:238492 14/79 (18%)
PDZ_signaling 209..289 CDD:238492 9/79 (11%)
HN_PDZD7_like 555..632 CDD:259824 20/84 (24%)
PDZ_signaling 866..954 CDD:238492 22/66 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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