DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Tamalin

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_620249.1 Gene:Tamalin / 192254 RGDID:70554 Length:394 Species:Rattus norvegicus


Alignment Length:388 Identity:87/388 - (22%)
Similarity:130/388 - (33%) Gaps:92/388 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1393 VEQRDEPEKPQPIINLASVDLPNVAPNSKQATVETT----PVVEMPP----DELQFESHQLPDDG 1449
            ::|::|.        .|:.||...||:|:.|....|    |....||    |||.          
  Rat     9 LQQKEEA--------TAAPDLAGRAPDSEAARAAPTPSGPPAAAAPPGAPGDELY---------- 55

  Fly  1450 EKEKDLHQESNDLLSGSSSSSVTTPITTPI---LVSATSSMDSVQSVIEVVNGMPIISNQQTDDD 1511
            ...:|.|..  :|....:.|..|.|.....   ..:.|.|.:..:.|:.:..|     :.||.. 
  Rat    56 AALEDYHPA--ELYRALAVSGGTLPRRKGSGFRWKNFTQSPEQQRKVLTLEKG-----DNQTFG- 112

  Fly  1512 DIDEVAAYDDGMHLEAEGTKDVRPVQEVTTLT-LDREHESDLGTLS--NHHSNISSISGIN---- 1569
              .|:..|  |:|...|        |.|..:| :.|.|||....|:  .....|:|::|:|    
  Rat   113 --FEIQTY--GLHHREE--------QRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGI 165

  Fly  1570 ----------ASSNI-PAATLISSSIKKTSTEAATTKPAAPQIPGKMELLSSNTGTTTTTTTATH 1623
                      ||.|: ...||..:||:|...||        ::....:.|....|...:......
  Rat   166 RHREIVDIIKASGNVLRLETLYGTSIRKAELEA--------RLQYLKQTLYEKWGEYRSLMVQEQ 222

  Fly  1624 HLHQATTTKQLLVQDYLSYASPPTY-SRLPPDGHEFPPNFSEP--LIMHSHPLKVTTE--LSYEI 1683
            .|......|...:.|.|.......| :.|.|....|.|..:.|  ....|...|..|:  :.:..
  Rat   223 RLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAAPGGARGGSRRAKGDTDDAVYHTC 287

  Fly  1684 QKGGKDESSAPPLPKTGPPATVPRKVYRQDLVINVEPAPSLTRDYQRSL---------SGGTP 1737
            ..||.:..:.||.|   |||..|.....:.....:.|||..|.....|:         .||.|
  Rat   288 FFGGAEPQALPPPP---PPARAPGPGSAETPASVLCPAPRATLSRSASVRCAGPGGGGGGGAP 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
TamalinNP_620249.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51 13/49 (27%)
PDZ_signaling 99..184 CDD:238492 24/102 (24%)
Interaction with PSCD3. /evidence=ECO:0000250 180..257 16/84 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..318 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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