DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbg and F28E10.4

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_500590.2 Gene:F28E10.4 / 185067 WormBaseID:WBGene00017902 Length:324 Species:Caenorhabditis elegans


Alignment Length:366 Identity:62/366 - (16%)
Similarity:130/366 - (35%) Gaps:66/366 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   686 SPPPLVVGKCMKIVDDTNTTTCYTSSSSGEEDEDDLDASNREYICEDGEKLGPPELINGPGPSEA 750
            :|.|..||: :::|.....:......:...:.|||:..|   |||                 |.:
 Worm    10 TPAPATVGQ-VRVVFSFKLSNHDIGKTDAVKIEDDMTVS---YIC-----------------SNS 53

  Fly   751 YFNMFWHSNMLPTIGEVEEEFSSLEPQSLTNGNLVKSEESKKLPKMEVNAGGLAQLTDDKIA--- 812
            :||.....:.:..:..|....|..:.: |..|.....|.|::        .|:..:|.:::|   
 Worm    54 FFNGLIMGDKIIRVNNVSGSASRCQSE-LLRGTACNVEVSRR--------KGVTPVTCERLAKSG 109

  Fly   813 -----DHDASATRADTRDEVTTNQTQEISSSSSSSVKSQKTTTTTRVTTTKTSSSSSSSS---CS 869
                 .|.......:....:||           :||..:......|...||...::.:||   |.
 Worm   110 CNLRKGHACFVLDVERPPHMTT-----------TSVGLKLGIIKRRAFVTKVDPNTIASSFFGCG 163

  Fly   870 STVIPDVAFKLQPYEERDDILSEPITTIHEERRVLSEQKTLSESRTRDALTGEEQLVTSANSKSS 934
            .:::......:...:..|:.:.|.::.:....:|    ..|.|.....|:..:.|....:.:...
 Worm   164 DSIMDMSGAPIPMTDNPDNFIREHLSRLSTGAKV----SFLVERPISVAMAKQYQKFIESITYDD 224

  Fly   935 SARFKKISSNDNLLDLGDE-QDMQEQPLTATITQ---ESSLRERLECPQDNQSIDRGTLTLSERG 995
            |    ::....:::::|.| .:|....|...:|.   .|.:|.|.:..........|::|:|...
 Worm   225 S----EVEMAQDVIEIGREASNMHFMILKKLVTPSILSSDVRRRKKSNNKTSESTEGSITISSAS 285

  Fly   996 KQLSEKEGLTTYTECETSEKESYLEGQQVLNGKGGFVSQDE 1036
            .::.....:|.:.:.:..|.:|:..|....:..|.|  .||
 Worm   286 TEMKITSDVTDFDDLKPVESKSHAAGSSSSDSGGAF--DDE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
F28E10.4NP_500590.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.