DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and mics-1

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_001343863.1 Gene:mics-1 / 179475 WormBaseID:WBGene00011890 Length:293 Species:Caenorhabditis elegans


Alignment Length:320 Identity:68/320 - (21%)
Similarity:104/320 - (32%) Gaps:131/320 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GSGSSPTMEEQIENVTVFRLPGERLGFGLKFQGGTRSTELVQK--LYIQSCAADSPASKVSTSWG 138
            |..|.|     :|.:||..:.....|||....|||.:...|..  :|:.|..::      |.|:|
 Worm    62 GQESVP-----LEALTVVEIEKTSKGFGFNIVGGTDNPHFVGDIGIYVSSVNSE------SKSYG 115

  Fly   139 NLREGDEIVSIDGRDVRELTRIDCVRGLKDNVAIKLVVRNGHGQKP-------PSEEDPQQQEHL 196
            .:|.||:|:|.||.|:...|..:.|...:.       |:.||..|.       ..:||..|....
 Worm   116 VVRTGDKILSFDGIDMTYKTHDEAVEVFRS-------VKIGHVAKMLIDREYLHLQEDRTQTPTA 173

  Fly   197 SITLNAQPPPPPPVPPRKLVRRQNSKENQAQLLIEKPLTPPPDAEYYLNLLTESIKAGSESDDTA 261
            |:::..|..|           :..|.:|.                      |::.|:.|.|:   
 Worm   174 SVSITPQVTP-----------QTRSTQNN----------------------TDTPKSMSHSE--- 202

  Fly   262 STISTVIDKFSVGSNYSSDSSLNGHELAKVLQPFTLLEQEFLPLEQPLGHPKLLIPGNNYENVEF 326
                             |.|.|..|.|:.|:                             |.:..
 Worm   203 -----------------SKSRLTSHGLSAVI-----------------------------ERIRG 221

  Fly   327 KTEKVNVYENVELRSPETTPTPKPRVQLATVEPKKRSII-PMPRKIPTPTKLPIEVTPPR 385
            |     |||..:.:|            :.:..|...||| .:||   ||.| |:.:..||
 Worm   222 K-----VYEEEDAQS------------VTSYAPSTHSIIDDVPR---TPRK-PLSLLDPR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492 24/88 (27%)
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
mics-1NP_001343863.1 PDZ_signaling 71..145 CDD:238492 24/79 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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