DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbg and Grid2ip

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:1027 Identity:206/1027 - (20%)
Similarity:336/1027 - (32%) Gaps:332/1027 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LPGERLGFGLKFQGGTRSTELVQK--------------LYIQSCAADSPASKVSTSWGNLREGDE 145
            |.|.|.|     .||.|.|..|.|              ::|:|....|||...|     |:.||.
Mouse   255 LLGGRTG-----PGGPRRTVRVYKGNKSFGFTLRGHGPVWIESVLPGSPAENAS-----LKSGDR 309

  Fly   146 IVSIDGRDVRELTRIDCVRGLKDNVAI-KLVVRNG---HGQKPPSEEDPQQQEHL-SITLNAQPP 205
            |:.::|.|:|..:....|..|:.:.|: .|||..|   ......|.:.|.:...| |:...|...
Mouse   310 ILFLNGLDMRNCSHDKVVSMLQGSGAMPTLVVEEGPVPFASDSDSLDSPTRASALTSLQWVADIL 374

  Fly   206 PPPPVPPRKLVRRQNSKENQAQLLIEKPLTPPPDAEYYLNLLTESIKAGSESDDTASTISTVIDK 270
            |       ..:|.|....:|.   ::..||||   |.|                   .:...:::
Mouse   375 P-------SSIRVQGRTFSQQ---LDHLLTPP---ERY-------------------GVCRALER 407

  Fly   271 FSVGSNYSSDSSLNGHELAKVLQPFTLLEQEFLPLEQPLGHPKLLIPGNNYENVEFKTEKVNVY- 334
            |....|..:          .::..:.:|:   .|.:|.|.  :.|.....||..|...||:..: 
Mouse   408 FFQHRNIDT----------LIVDVYPVLD---TPAKQVLW--QFLYQLLTYEEQELCQEKIACFL 457

  Fly   335 ---------ENVELR---SPETTPTPKPRVQLATVEPKKRSIIPMPRKIPTPTKLPIEVTPPRVP 387
                     .:::|.   :||.||.|:||..|......:||:    |.....|.|  ...|...|
Mouse   458 GYTAMTEPESSLDLEPESTPEPTPEPQPRSSLRASSMCRRSL----RSQGLETSL--SCGPGDCP 516

  Fly   388 ILEEPKTPTNNKVDS----PKTPTNELK-------ESPISAT---KIPKAKFSRAK--------T 430
            .:..|..|...:...    |:||..::.       ||.::::   ||.....|||.        |
Mouse   517 EMPLPLIPGERQAGDGTSLPETPNPKMMSAVYAELESRLNSSFKGKIGTMSKSRASPPVPSLVGT 581

  Fly   431 EGEIKLH---------LPAPKQQ--------SPQSKSRIPIVSTPTAQKTVPKPVSPTMNG-TPL 477
            .|...|.         ||:|...        ||.|....|..|..:::...|:|...:::. :|.
Mouse   582 SGPRTLSGVSWPSDRLLPSPCYDPLCSGGLASPSSSESHPYASLDSSRAPSPQPGLGSIHADSPP 646

  Fly   478 SSNIPRLLQKQK----------SETDLKLNLYRSKSKESSPRPPLQRANSAEAPERTFIPVLLNG 532
            |.:..|...::|          .:||..|:   :.|::..||  |...:....||..:..:..:.
Mouse   647 SPDPIRPPSRRKLFAFSRPVRSRDTDRFLD---ALSEQLGPR--LSIVDDFLTPENDYEEMSFHD 706

  Fly   533 -------NSKSSNSLESVSSI--GSSSSGNSVRS-----PKGPKPKPPERVQSLQKTQIPKLQAL 583
                   |.:||.| |.|||.  |||.:.:|:..     |..|.|.||.....      ||..:.
Mouse   707 DQGSFVTNERSSAS-ECVSSSEEGSSLTYSSISDHIPPPPLSPPPPPPLPFHD------PKPSSR 764

  Fly   584 ----PTTPPQQIPKLSMQ---TFKQSPPTPRSTPVGTPSPTSNREIRFKIQTYESKTQDEDKLPS 641
                |..|||.:.|...|   .....||.|...||....|..:|.:..:    .|:|........
Mouse   765 TSDGPRGPPQSLTKPLTQINHPVPPPPPPPLPPPVPCAPPMLSRGVGHR----RSETSHMSVKRL 825

  Fly   642 LFDLVHSQE--------NDKDKDRDSDSLKTHNSITALLAAAAAEAADLSRESPPPLVVGKCMKI 698
            .::.|.:.|        .|.|.|:.||.:|               ..||                
Mouse   826 RWEQVENSEGTIWGQLGEDSDYDKLSDMVK---------------YLDL---------------- 859

  Fly   699 VDDTNTTTCYTSSSSGEEDEDDLDASNREYICEDGEKLGPPELINGPGP------------SEAY 751
                                 :|....::          ||:.:.||.|            .:||
Mouse   860 ---------------------ELHFGTQK----------PPKPVPGPEPFRKKEVVEILSHKKAY 893

  Fly   752 FNMFWHSNMLPTIGEVEEEFSSLEPQSLTNGNLVK-------SEESKKLPKMEVNAGGLAQLTDD 809
            ......:::..|.||:.:...|:||:.|...:|.:       ::|.::........|.|::  .|
Mouse   894 NTSILLAHLKLTPGELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRYQAFREAPGRLSE--PD 956

  Fly   810 KIADHDASATRADTR------DEVTTNQTQEISSS------------------------------ 838
            :......|.....||      ......:|:||..|                              
Mouse   957 QFVLQMLSVPEYKTRLRSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKILEFVLAMGNY 1021

  Fly   839 -SSSSVKSQKTT-----TTTRVTTTKTSSSSSSSSCSSTVIPDVAFKL-QPYEE----RDDILSE 892
             :....|:.|||     ..|.:.:|||...      .||.:..:|..| |.:.|    ..|:.:.
Mouse  1022 LNDGQPKTNKTTGFKINFLTELNSTKTVDG------KSTFLHILAKSLSQHFPELLGFAQDLPTV 1080

  Fly   893 PITTIHEERRVLSEQKTLSESRTRDALTGEEQLVTSANSKSSSARFKKISSN 944
            |:.....:|.:..:...|.::      ..|.|:...:.:.||..||..:.::
Mouse  1081 PLAAKVNQRALTGDLADLHDT------VSEIQVACQSMAPSSEDRFAVVMAS 1126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492 28/96 (29%)
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
Grid2ipNP_001152793.1 PDZ_signaling 9..69 CDD:238492
HN_L-delphilin-R1_like 122..201 CDD:259820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270 8/19 (42%)
PDZ_signaling 269..342 CDD:238492 20/77 (26%)
HN_L-delphilin-R2_like 378..457 CDD:259821 21/118 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541 21/80 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821 34/121 (28%)
FH2 812..1180 CDD:280362 63/395 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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