DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbg and Lnx2

DIOPT Version :9

Sequence 1:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster
Sequence 2:NP_542985.4 Gene:Lnx2 / 140887 MGIID:2155959 Length:687 Species:Mus musculus


Alignment Length:535 Identity:120/535 - (22%)
Similarity:180/535 - (33%) Gaps:171/535 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  2234 REKFERSAAAQAQTQNHSPVIHKVTQKPHHERFSSLDSLASSSSGVSSTTQNVST------TQET 2292
            |...||...:|.|||........|...|     .:|.. .:..||.....:|::.      |:|.
Mouse   145 RVDLERRKTSQTQTQIEGETGSTVIDPP-----GTLPP-ETDCSGTVPGERNLTPASLPVWTEEP 203

  Fly  2293 ATEFGSFSSLGSNQSLITAQDVQQIVEEADPPLKTPEAFI--IVLQRENPESSIGITLAGGSDYE 2355
            ..:..:|      :....|..|||       ||..||..|  |.:.|.||...:||::.||::..
Mouse   204 GLDNPAF------EESAAADSVQQ-------PLSLPEGEITTIEIHRSNPYIQLGISIVGGNETP 255

  Fly  2356 AKEITIHKILSNTPAAKDGRLKKGDRILAVNGMSMRGLTHRESISVLKTPRPEVVLVVTRSESL- 2419
            ...|.|.::..:...|:||||..||:||.||...:..::|..:.:||..|...:.|.|.|.... 
Mouse   256 LINIVIQEVYRDGVIARDGRLLAGDQILQVNNYDISNVSHNHARAVLSQPCSTLQLTVLRERRFG 320

  Fly  2420 ---------------VVKALTKKRSSL-----------------------GSLSSLNEKPTELDY 2446
                           |.:.|..||.|.                       |.|::.:.:....|.
Mouse   321 SRANSHADGSAPRDEVFQVLLHKRDSTEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLNSNDR 385

  Fly  2447 ERKRNYHKASRSLDLDLDLVSNEAGE-------SPVATTPSTGS-----------VSPP---QPA 2490
            ....|.|............:...:||       .|....||.||           ..||   :|.
Mouse   386 VLAINGHDLKHGTPELAAQIIQASGERVNLTIARPGKPQPSNGSREAGAHSSSNHAQPPSHSRPG 450

  Fly  2491 SLHD-------------------EDAEATIAGIRARR---------------------QLSRGDA 2515
            |..|                   |....|:||.|..:                     ::.|||.
Mouse   451 SHKDLTRCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDV 515

  Fly  2516 ---------AKLSTSE---LLERAAEARNAIAAEIRAQ-AEDAA----------------ASGGG 2551
                     ..||.||   :|:.:|.:...|...:..| ||:||                ||...
Mouse   516 LLNINGIDLTNLSHSEAVAMLKASAASPAVILKALEVQIAEEAAQATEEQPSAFSENEYDASWSP 580

  Fly  2552 A------------RCVEIVKDSCGL---GFSIEGGFDSPLGNRPLIVKKVFMGGAAQKTNQVRNG 2601
            :            .|.:||.....|   ||||.||::....|:|..:|.:.:|..|....:::.|
Mouse   581 SWVMWLGLPSALHSCHDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCG 645

  Fly  2602 DEILSINGASTSRMT 2616
            |.|:::||.||..|:
Mouse   646 DMIVAVNGLSTVGMS 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 27/83 (33%)
PDZ_signaling 2553..2634 CDD:238492 23/67 (34%)
Lnx2NP_542985.4 mRING-HC-C3HC3D_LNX2 46..90 CDD:319694
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..175 9/34 (26%)
NPXY motif 207..210 0/2 (0%)
PDZ 229..315 CDD:214570 28/85 (33%)
PDZ_signaling 336..418 CDD:238492 12/81 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 417..454 9/36 (25%)
PDZ_signaling 463..539 CDD:238492 13/75 (17%)
PDZ_signaling 596..680 CDD:238492 22/65 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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