DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3919 and CG9948

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_648063.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster


Alignment Length:174 Identity:44/174 - (25%)
Similarity:74/174 - (42%) Gaps:28/174 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KICHLVKLHPCLYDRHD-DNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYARSIKL--H 81
            |:..||:.:|.||.|.. .||.......:.|..|:..|...|..|..||.|:...:.:..:.  .
  Fly    14 KLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEMMGCDVDFCLMRWNNLHYQFRKEFRRADT 78

  Fly    82 HGANTYYLNSELKFLQKHITPGVPVPLRGRRSRPKGQEEHDEGDPETPVEAILEMVHSPSFLNSE 146
            .|:...|| ..|:||.: |.|...|     :::||..::......||||:.:.:     :|.:.:
  Fly    79 SGSTWPYL-ERLRFLAE-IQPPSKV-----KTKPKTNKQEATIQTETPVQFLWD-----TFEDGD 131

  Fly   147 HAQSRHSTDPASATDVEATQFNNEPSS--IMD---FEDTVPAEM 185
            ..|.       |:|.: ..:...|||.  |.:   :|:..|||:
  Fly   132 VPQQ-------SSTFI-IEEVIEEPSEQIIQEEIIYEEQEPAEI 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 23/82 (28%)
BESS 226..260 CDD:460758
CG9948NP_648063.1 MADF 14..95 CDD:214738 23/82 (28%)
Blue background indicates that the domain is not in the aligned region.

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