DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3919 and CG3386

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_612049.1 Gene:CG3386 / 38081 FlyBaseID:FBgn0035152 Length:288 Species:Drosophila melanogaster


Alignment Length:264 Identity:53/264 - (20%)
Similarity:103/264 - (39%) Gaps:56/264 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PCLYDRHDDNYLRKSTVKNAWKEISNEMR----NSVKSCKERWRNI-RSSYAR---------SIK 79
            |.|:|.|..||..|.....|::.:..::|    |:.::...|..|| |::|.|         .:.
  Fly    28 PELWDVHHLNYRNKELRNRAYELLERKLREIQPNATRTEVGRRINIFRTNYRREQMRILKQKELG 92

  Fly    80 LHHG--ANTYYLNSELKFLQ-----KHITPGVPVPLRGRRSRPKGQEEHDEGDPETPVEAILEMV 137
            ||..  ..|.:....:.||.     :|.|      .:||..|.| |:...|.|.:.|::      
  Fly    93 LHSDLCKPTLWFYDYMGFLLTQETFQHRT------RKGRGGRQK-QDFRREKDDKYPLK------ 144

  Fly   138 HSPSFLNSEHAQSRHSTDPASATDVEATQFNNEPSSIMDFEDTV---------PAEMRTESDSSE 193
             :|. ||:|      |.......|..|..:.:||::....|.::         |.|.:.|   .:
  Fly   145 -NPD-LNTE------SVCDWPIKDDNAFNYQSEPTAPQSEEGSLLSPKLEIIEPEEGQCE---VK 198

  Fly   194 KEAKVGEITLYRVPL--LEFPKTSTRCIEALPIMDFDDAFLQGLRPEIKHMNFHQKLYFKRRVYD 256
            :|..:|.....:.|.  ::....:.|....:.:.:..:...:....:.:.|:..|::..::.:.|
  Fly   199 EENSLGNSLETKEPTSSIQTDPENERGTAPMQLSESSEVLARSWAIQYEEMSPTQRILARKAIAD 263

  Fly   257 LLGE 260
            :|.|
  Fly   264 ILFE 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 21/91 (23%)
BESS 226..260 CDD:460758 4/33 (12%)
CG3386NP_612049.1 MADF_DNA_bdg 20..111 CDD:463144 19/82 (23%)

Return to query results.
Submit another query.