DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3919 and CG4404

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:325 Identity:73/325 - (22%)
Similarity:126/325 - (38%) Gaps:110/325 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYARSIKL-- 80
            |.:....|:..|||::.....|.:|..|:.||::::|:::::|::|:||||.||||:.||:||  
  Fly    15 NVRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLRSLKLAR 79

  Fly    81 ---HHGANTYYLNSELKFLQKHITPGVPVPLRGRRS----------RPKGQ----EEHDE----- 123
               ..|...|||:..|:||         ||....||          |..||    ::.||     
  Fly    80 TQTGRGKRKYYLSKYLQFL---------VPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAE 135

  Fly   124 -----GDPETPVEAILEMVHSPSFLNSEHAQSRHSTDPASATDVEATQFNNEPSSIMDFE-DTVP 182
                 .|.|.|::..:.        ..||.:::.             |...:|::.:... .::.
  Fly   136 EEAKVSDGEMPLDVQVS--------EEEHRRNQE-------------QDREQPTACLPLRLHSIK 179

  Fly   183 AEMRTESDSSEKEAKVGEITLYRVPLLEF------------------------------------ 211
            .|..:.:.:.:.|..|.:.:|..||....                                    
  Fly   180 VEHDSSNANQQLERMVSQQSLVSVPAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTSPPPP 244

  Fly   212 PKTSTRCIEALPIM-----------DFDDAFLQGLRPEIKHMNFHQKLYFKRRVYDLLGEIFHSE 265
            |:.:|   .||.:.           |.|.:||..|.|.||.||..|...|:::|..|:.:|..::
  Fly   245 PQPAT---SALSVFTGGPGGGGSQPDADYSFLISLHPYIKEMNGKQNRKFRQKVVGLIDDILDNK 306

  Fly   266  265
              Fly   307  306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 31/84 (37%)
BESS 226..260 CDD:460758 14/33 (42%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 33/94 (35%)
BESS 267..301 CDD:460758 14/33 (42%)

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