DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3919 and madf-10

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_492729.1 Gene:madf-10 / 190925 WormBaseID:WBGene00013717 Length:234 Species:Caenorhabditis elegans


Alignment Length:267 Identity:36/267 - (13%)
Similarity:85/267 - (31%) Gaps:92/267 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AINAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRN--------SVKSCKERWRNIRS 72
            ::...:|..:...|.|:|...:. :..:..||.:.|:...:..        :::..::.|:|::.
 Worm    48 SVRFAMCEAIAHRPGLWDSTREK-VSSAARKNLFAEVVEVINQQFVLSPPLTIEEIEKHWKNLKD 111

  Fly    73 SYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLRGRRSRPKGQEEHDEGDPETPVEAILEMV 137
            :|.                                    ::|.|...:||    ..|:....:..
 Worm   112 TYV------------------------------------KTRRKLTFDHD----GCPIRPKWKFF 136

  Fly   138 HSPSFLNSEHAQSRHSTDPASATDVEATQFNNEPSSIMDFEDTVPAEMRTESDSSEKEAKVGEIT 202
            .|..||:|.:...       ........||..:|..:.            :..||:||.      
 Worm   137 DSLMFLDSVNQND-------FVMKKRPMQFQGQPYDLY------------QGPSSKKEK------ 176

  Fly   203 LYRVPLLEFPKTSTRCIEALPIMDFDDAFLQGLRPEIKHMNFHQKLYFKRRVYDLLGEIFHSEQS 267
                            :|.:|..::.: |.:.|...:|.:.:..:::: .::...:.:|.:..|.
 Worm   177 ----------------LEEMPSDEYME-FCRSLYLPLKEIGYKDRIHW-LKIQKSIRDIVYEAQL 223

  Fly   268 ASSTHPA 274
            .|.|..|
 Worm   224 ESVTKAA 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 10/87 (11%)
BESS 226..260 CDD:460758 3/33 (9%)
madf-10NP_492729.1 MADF 53..147 CDD:214738 19/134 (14%)

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