DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3919 and madf-2

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_492896.1 Gene:madf-2 / 173019 WormBaseID:WBGene00009461 Length:290 Species:Caenorhabditis elegans


Alignment Length:213 Identity:50/213 - (23%)
Similarity:71/213 - (33%) Gaps:79/213 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GSIHYPRSTT-----EMWPDLIKKGKEG----SLDAIETYVFWNAHEPTRRQYDFSGNLDLIRFL 96
            ||:..||:.:     ::|.||.|.|..|    :|..:...   .:...::||... |.:.|..||
 Worm   100 GSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQA---QSQSQSQRQQTL-GEVTLEEFL 160

  Fly    97 KTIQNEGMYGVLRIGPYVC-----AEWNYGGFPVWLHNMPGMEF-RTTNTAFMNEMQNFTTMIVE 155
            ...      ||:|....|.     ||.|.||:           | ...||.|..|.|        
 Worm   161 VRA------GVVREEAQVAARAQIAENNKGGY-----------FGNDANTGFSVEFQ-------- 200

  Fly   156 MVKKEKLFASQGGPIILAQIENEYGNVIGSYGEAGKAYIQWCANMANSLDV---GVPW------I 211
                      |..|.::|      ..|:|:.|          |..||||.|   .:|.      .
 Worm   201 ----------QPSPRVVA------AGVMGNLG----------AETANSLQVQGSSLPLNVNGART 239

  Fly   212 MCQQDDAPQPMLNTCNGY 229
            ..||....||::....|:
 Worm   240 TYQQSQQQQPIMPKQPGF 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 17/67 (25%)
BESS 226..260 CDD:460758 1/4 (25%)
madf-2NP_492896.1 MADF 11..107 CDD:214738 3/6 (50%)

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