DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3919 and LOC110438041

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:XP_021323091.1 Gene:LOC110438041 / 110438041 -ID:- Length:277 Species:Danio rerio


Alignment Length:287 Identity:60/287 - (20%)
Similarity:101/287 - (35%) Gaps:80/287 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VKLHPCLYD--RHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYAR-SIKLHHGA-- 84
            |:.|..:||  .||...|  ...::||.:||.....:...|::.|:|:|..:.| ..|:|..:  
Zfish    14 VRRHRIIYDPNLHDHGDL--ELTQSAWNDISAATGKNEAVCRKAWKNLRDKFVRIKRKIHTNSKD 76

  Fly    85 -NTY-YLNSELKFLQKHITPGVPVPLRGRRSRPKGQEEHD--EGDPETPVEAILEMVHSPSFLNS 145
             .:| .:.:||.:|.:::           :.|.|.....|  :|            |....|:.:
Zfish    77 PGSYRKIVAELGWLCQYV-----------KHREKSLNAKDGCKG------------VTFEEFMKT 118

  Fly   146 EHAQSRHSTDPASATDVEATQFNNEPSSIMDFEDT------------VPAEMRT---ESDSSEKE 195
            ::.|    ...||.|....|..|..|.|:|.....            |||...|   ...||:..
Zfish   119 DNLQ----MSSASGTSETGTSDNPSPLSLMPSSPVPSTPVLPTQSTLVPATSSTPPPPCPSSKCY 179

  Fly   196 AKVGEITLYRVPLLE------------FPK---TSTRCI-----------EALPIMDFDD-AFLQ 233
            .....::.:.||.:.            .||   ||..|:           |..|..|.:| .|..
Zfish   180 PSPCLVSAFSVPNISPSPNASPSSSELMPKRKSTSEACLLNMLEQMEWTREKTPHQDSEDFRFAS 244

  Fly   234 GLRPEIKHMNFHQKLYFKRRVYDLLGE 260
            .:...:..::...|...|.::|.:|.|
Zfish   245 VVVDMLAKIDPRMKSEVKFKIYQMLYE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 22/81 (27%)
BESS 226..260 CDD:460758 7/34 (21%)
LOC110438041XP_021323091.1 MADF 14..82 CDD:214738 19/69 (28%)

Return to query results.
Submit another query.